Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4713g00013 ATGGTGAGAGAGAGAGACATCATGGGCACATACTCATCATCAAGAGCCTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGTTCTCACCCTCTACTCCAGGTGCGAAGGTATGTTTATCACGACGTGATTCGATTAGATGATCTGGAAAAACTCATTGATTGTTCCAATATTCAGCCCTATACTATAAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTATCATGCAAGGTTGATTACATGGTGTACACGGGTCAAAGCTTGTCAAACATTTTACATCGATTCGATGAATCTGATTTTGCAATATCGCAGTTCGAGGGTTTAAGAGTGGATGGTTCAGAGGTAACTGATGAAGATACCCAGATTGCCCCTAGCTCCTCTTACTCCAACACCGAGGCCACCAGCAATTCCGTAATTTCATGTGAACCTAATAACAACGTGAAGAAGGGCAAGGGCAACACCTTCCTTCCAGGGATCGTCCTTTCTCTTGGCAGTAGAAGAAAGGGTGCCCCTCACAGGGCCCCCCTCTCCTGA 753 0.4701 MVRERDIMGTYSSSRACGGGDMNEKPAWLERLMAETFFGACGVHQDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYTGQSLSNILHRFDESDFAISQFEGLRVDGSEVTDEDTQIAPSSSYSNTEATSNSVISCEPNNNVKKGKGNTFLPGIVLSLGSRRKGAPHRAPLS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4713g00013 250 MobiDBLite consensus disorder prediction 192 216 - -
Vium4713g00013 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 249 - -
Vium4713g00013 250 Pfam PLATZ transcription factor 80 151 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4713g00013 Vium-Chr4713 102559 107790 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium4713g00013 PLATZ 1.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4713g00013 - - gmx:100806558 479.559