Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4713g00012 ATGGTGAGAGAGAGAGACATCATGGGCACATACTCATCATCAAGAGCCTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGTTCTCACCCTCTACTCCAGCCCTATACTATAAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTATCATGCAAGGTTGATTACATGGTGTACACGGGTCAAAGCTTGTCAAACATTTTACATCGATTCGATGAATCTGATTTTGCAATATCGCAGTTCGAGGGTTTAAGAGTGGATGGTTCAGAGGTAACTGATGAAGATACCCAGATTGCCCCTAGCTCCTCTTACTCCAACACCGAGGCCACCAGCAATTCCGTAATTTCATGTGAACCTAATAACAACGTGAAGAAGGGCAAGGGCAACACCTTCCTTCCAGGGATCGTCCTTTCTCTTGGCAGTAGAAGAAAGGGTGCCCCTCACAGGGCCCCCCTCTCCTGA 678 0.4808 MVRERDIMGTYSSSRACGGGDMNEKPAWLERLMAETFFGACGVHQDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKVDYMVYTGQSLSNILHRFDESDFAISQFEGLRVDGSEVTDEDTQIAPSSSYSNTEATSNSVISCEPNNNVKKGKGNTFLPGIVLSLGSRRKGAPHRAPLS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4713g00012 225 MobiDBLite consensus disorder prediction 166 191 - -
Vium4713g00012 225 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 78 224 - -
Vium4713g00012 225 MobiDBLite consensus disorder prediction 161 191 - -
Vium4713g00012 225 Pfam PLATZ transcription factor 77 126 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4713g00012 Vium-Chr4713 102559 107792 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium4713g00012 PLATZ 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4713g00012 - - gmx:100806558 415.231