Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4713g00006 ATGGCTTCAACTGAGTTTGGTGAAGAAGGTGATAGCAGAGGCGGTATGTGGGTTTTGGAACAGAGGATTGACCAGCCGATGGATGAAGAAGCTGAAAAGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGCACTTCCCCCTTATACGTTTTCTATAATACATTTCCTCATGGAATTGACAACCAGGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACCCTGGTGCCGCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACATTGGCCCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACCATTCCCAACCAGCATCGTACGGATGAAGAGCTAACAACATATAGTCGATCTACCATCCGTGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAGCAACCTTATATTAAAGATATCATTCTTATTCTGGCCCTCGTTGGTACTTGCATGGTGATTGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGCAACGAAGTAGTGGTATTGGTTGCTGTTGTTATACTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCGGTTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGCATCTTCAACATCTGTAAATATGACAGCAGTGTTCTAAAAGCTTTTTCACCAGTGTATATATACCGCTATCTAAAACGAGGAGGTAAAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCTTTTACTCTCCTAGTCTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGCATAACTTGGATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAGGCCACAATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCACATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGACATAAATTGGATCCTTATGATTCTATGCATTGCTGTTACAGCAGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTTGTGCTAGTGATGCTGGTTACAACGCTGCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTGGTTGTGGTGTTCACTGGCTTATCACTGATAGTGGAATGCACATACTTCTCTGCAGTACTCTTCAAAATTGACCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTATGGCACAGTGAAACGGTACGAGTTTGAAATGCACAGTAAGGTGTCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGGTATACACAGAACTTGCAAGTGGAGTACCCCATATATTTTCTCACTTCATCACAAACCTACCAGCTATTCATTCTGTTGTTGTTTTCGTATGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGATGAAAGGTTCCTTGTGAAGCGGATTGGACCAAAGAACTTCCACATGTTTCGGTGCGTTGCGAGGTACGGATACAAAGATTTGCACAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCACAACCTTTTTGTGTTTGTTAAGTTGGAGTCTATGATGGAGGGATGCTCGGATTCAGATGACTACAGTTTATATGAACAGCAAACTGAGAGATCAAGAGAAGGTCTACTACTGAACAATAATGCAATCACATCATCAACGAATATGGATCCAACAGTTTCTTCTTTGGATTCTATAGTGTCAGTTACTTCTCCATCACAGTTGAATGCTACTGTTAGGTCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCACATACTGGGAAACACAGTTGTGAGGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTCAGGAAGATATGCAGAGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTGAATGTTGGTCAGGTTTTCTATGTATAG 2376 0.415 MASTEFGEEGDSRGGMWVLEQRIDQPMDEEAEKLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIDNQEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEELTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVILVGLFSMQHYGTDRVGWLFAPVVLLWFLLIGGIGIFNICKYDSSVLKAFSPVYIYRYLKRGGKDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLDHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKIDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTERSREGLLLNNNAITSSTNMDPTVSSLDSIVSVTSPSQLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4713g00006 791 Pfam K+ potassium transporter 53 623 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4713g00006 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 33 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4713g00006 791 NCBIfam potassium uptake protein 51 791 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4713g00006 Vium-Chr4713 63161 67761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4713g00006 8 791 Inorganic Solute Cotransporters AT2G35060 77.452 0.0 1208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4713g00006 K03549 - gmx:100796449 1431.77