Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4713g00005 ATGGCTTCAACTGAGTTTGGTGAAGAAGGTGATAGCAGAGGCGGTATGTGGGTTTTGGAACAGAGGATTGACCAGCCGATGGATGAAGAAGCTGAAAAGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGCACTTCCCCCTTATACGTTTTCTATAATACATTTCCTCATGGAATTGACAACCAGGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACCCTGGTGCCGCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACATTGGCCCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACCATTCCCAACCAGCATCGTACGGATGAAGAGCTAACAACATATAGTCGATCTACCATCCGTGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAGCAACCTTATATTAAAGATATCATTCTTATTCTGGCCCTCGTTGGTACTTGCATGGTGATTGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGCAACGAAGTAGTGGTATTGGTTGCTGTTGTTATACTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCGGTTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGCATCTTCAACATCTGTAAATATGACAGCAGTGTTCTAAAAGCTTTTTCACCAGTGTATATATACCGCTATCTAAAACGAGGAGGTAAAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCTTTTACTCTCCTAGTCTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGCATAACTTGGATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGCCAGGCCACAATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCACATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGACATAAATTGGATCCTTATGATTCTATGCATTGCTGTTACAGCAGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTTGTGCTAGTGATGCTGGTTACAACGCTGCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTGGTTGTGGTGTTCACTGGCTTATCACTGATAGTGGAATGCACATACTTCTCTGCAGTACTCTTCAAAATTGACCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTATGGCACAGTGAAACGGTACGAGTTTGAAATGCACAGTAAGGTGTCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGTATCTTCCTGTCTACACTGTCCCAGAAGATGAAAGGTTCCTTGTGAAGCGGATTGGACCAAAGAACTTCCACATGTTTCGGTGCGTTGCGAGGTACGGATACAAAGATTTGCACAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCACAACCTTTTTGTGTTTGTTAAGTTGGAGTCTATGATGGAGGGATGCTCGGATTCAGATGACTACAGTTTATATGAACAGCAAACTGAGAGATCAAGAGAAGGTCTACTACTGAACAATAATGCAATCACATCATCAACGAATATGGATCCAACAGTTTCTTCTTTGGATTCTATAGTGTCAGTTACTTCTCCATCACAGTTGAATGCTACTGTTAGGTCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCACATACTGGGAAACACAGTTGTGAGGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTCAGGAAGATATGCAGAGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTGAATGTTGGTCAGGTTTTCTATGTATAG 2277 0.4163 MASTEFGEEGDSRGGMWVLEQRIDQPMDEEAEKLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIDNQEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEELTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVILVGLFSMQHYGTDRVGWLFAPVVLLWFLLIGGIGIFNICKYDSSVLKAFSPVYIYRYLKRGGKDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLDHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKIDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLYLPVYTVPEDERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTERSREGLLLNNNAITSSTNMDPTVSSLDSIVSVTSPSQLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4713g00005 758 Pfam K+ potassium transporter 53 556 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4713g00005 758 NCBIfam potassium uptake protein 51 555 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4713g00005 758 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 33 555 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4713g00005 Vium-Chr4713 63161 67764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4713g00005 5 758 Inorganic Solute Cotransporters AT1G31120 72.935 0.0 1128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4713g00005 K03549 - gmx:100796449 1349.73