Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4703g00005 ATGTTAAAAGTAAAAGCCTGCTACGCTGAGTGGAAACTTGGACAGNCAAGATACAGGACAGAGGCCTGTAAGGATGGAAAGAACTGCAAGAGAAAGGTTTGTTTCTTTGCACACACACCTCGCCAGCTGAGAATTTTACCGGTAACTTCTCCTTCTTCGAATGACATTTCATGCAAGAAGAACATTAACAATCTCTTCAACCATGCTTCAAGATCCAACAACAACGGCTGTTGTGTTTTTTGCCATTGTGTTTCTTCTTCCTCTTCTTCTTCCACCGCTTCTCCAACTTCAACCCTCTTCAACATGTCTCATTACTCACCACCGCTATCTCCATCCTCCTCCTCCTCCTCACCACCTCCTTCTCCCTTGAAACCCCGAAAAGGGGTTTCTGTTTCTCCAATTTCCCTATATGGTGCTGCGAATGTAAACCCTCGTCATGGGGTGGTGAGTTACAAAGAAGCCTTCGCTGAATTTGTGAACTCCTTGGAGGGGTTGAGTTTGAACGAGGGTTCTCCTGTTTCTGGTGCCAAAACATTGAACTTGCCTTGGATTGATGTTTCTCTGAACTGTGAGGAACAACAGCGACAACCGCTCATTGCTTCTTCTTTTGGCTGCGAAGATCAGCAGAAGTTTATTTTTTCACCATCCTCCACTCAGACACCCACAAATGTTGCGTTTTGCAGCAACAGATTCACAGGCAACAACAACAACAACGTTGTCGGTGCTGACTCAAATGTCCCAGATCTTGCGTGGGTAAACGAGTTGCTGATGTAG 774 0.4548 MLKVKACYAEWKLGQXRYRTEACKDGKNCKRKVCFFAHTPRQLRILPVTSPSSNDISCKKNINNLFNHASRSNNNGCCVFCHCVSSSSSSSTASPTSTLFNMSHYSPPLSPSSSSSSPPPSPLKPRKGVSVSPISLYGAANVNPRHGVVSYKEAFAEFVNSLEGLSLNEGSPVSGAKTLNLPWIDVSLNCEEQQRQPLIASSFGCEDQQKFIFSPSSTQTPTNVAFCSNRFTGNNNNNVVGADSNVPDLAWVNELLM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4703g00005 257 MobiDBLite consensus disorder prediction 112 126 - -
Vium4703g00005 257 PANTHER UNKEMPT FAMILY MEMBER 15 256 IPR045234 -
Vium4703g00005 257 MobiDBLite consensus disorder prediction 108 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4703g00005 Vium-Chr4703 51870 53043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4703g00005 10 44 C2H2 Transcription Factor Family AT5G07500 62.857 1.36e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4703g00005 K23047 - gmx:100787049 330.102