Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium468g00012 ATGACCGGACAATCTAGAAAGTGGATGGTCCTGGTGGCGACCATCTGGATTCAGGCCTTCACCGGTACAAACTTCGACTTCTCCGACTACTCCTCTTCCCTCAAATCCCTTCTCAAAATCTCTCAGATCAAACTCAACTACCTGGCCACGGCCAACGACATGGGCAAGGTCTTCGGCTGGTCCTCCGGCCTCGCCCTCTCTCGTCTCCCGCTCTCCGTCGTCATCTTCATCGCCTCCGCCATGGGACTCCTCGGCTACGGCCTACAGTGGCTCGCCATCAAAAATCTCATCGCCTTGCCTTATTACCTGTTCTTTCTTCTGAGTTTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGCTTTGTTCTCTGCATTAGGAATTTTCCAGTGAACAGACCCCTTGCATTGTCTCTCACAGTGAGTTTCAATGGCGTGAGTGCTGCACTCTACACACTTGCTGCCAATTCAATAGACCCTTCATCTGATTCACTCTACCTTCTCTTGAACGCCGTTGTGCCTCTTCTCACTTCCCTTGCAGCACTAATCCCAATTCTTCTCCAACCTCCTTTAGACTCCCTATCTAGATCTGCAGATGCTGCTCGCAGAAACTCAGTGATATTTCTAGTACTAAACTTTCTTGCCATTTTCACTGGCATTTACCTCCTCCTCTTTGCGTCATCAACTTCTGACGAAGCCACATCGAGGATCTACTTTGGTGGGGCCATTTTTCTCCTCGTATCCCCACTATGCATCCCTGGCACCATCTATGCTCGAGATTGGTTTCACAATGCCATCCATTCCAGCTTTCAGGTGGAAGGCTCTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTCCTCACCCGTCAGAACAGTGCTCTCAATCTCAGCAATGGAGATGATCACGGCCTGTTGGGTGAGAATGGATCCGTGCATGGAGGTCAGAGGGCAAAAACCAGTGACGTGGGCTGTGACAAGGTGCTTGGTCAAGATCAGTTGACAATGCTAGGAGAAGAGCACACCGCTGCAGAGGTAGTCCAGAGGGTGGATTTCTGGCTCTATTATATTGCATACTTCTGTGGTGGCACAATTGGTCTTGTCTACAGCAACAATCTGGGACAGATAGCTCAATCTTTAGGCCTGAGTTCAAGTATATCTACCCTTGTCACGCTATACTCATCATTTTCTTTCTTTGGTCGATTGCTTTCAGCTGTACCAGACTACATTCGAAACAAATTCTACTTTGCAAGAACCGGATGGCTAGCAATTGGGCTTTTCCCAACCCCAGTTGCATTTATATTGCTTGCTGTATCAGACAGTGAAGCTGCACTTAAAGTTAGCACTGCACTGATTGGTCTGAGTTCCGGTTTCATCTTCGCAGCAGCAGTGGCAGTTACATCGGAACTATTTGGACCCAACAGTGTGAGTGTCAATCACAACATTCTCATAACGAACATTCCAATTGGGTCTCTTCTGTATGGTTTTCTGGCTGCAGCGATCTACGATGCCAATGCTTACTCAGTCACAACAGGTGACTTTATGGGTGACACACTGGTGTGCATGGGAAGGAAGTGCTACTTCTGGACATTTGTGTGGTGGGGAGGAATATCTGTACTAGGACTAGCTTCTAGTGTGCTGTTGTTCTTGAGAACCAAACACGCCTATGATCATTTTGAGAGACATCGTTCGAGGATTTCGGCGCAGTCACTTGTGTCTTAG 1737 0.4778 MTGQSRKWMVLVATIWIQAFTGTNFDFSDYSSSLKSLLKISQIKLNYLATANDMGKVFGWSSGLALSRLPLSVVIFIASAMGLLGYGLQWLAIKNLIALPYYLFFLLSLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNAVVPLLTSLAALIPILLQPPLDSLSRSADAARRNSVIFLVLNFLAIFTGIYLLLFASSTSDEATSRIYFGGAIFLLVSPLCIPGTIYARDWFHNAIHSSFQVEGSGFILVHVDDLELHKELLTRQNSALNLSNGDDHGLLGENGSVHGGQRAKTSDVGCDKVLGQDQLTMLGEEHTAAEVVQRVDFWLYYIAYFCGGTIGLVYSNNLGQIAQSLGLSSSISTLVTLYSSFSFFGRLLSAVPDYIRNKFYFARTGWLAIGLFPTPVAFILLAVSDSEAALKVSTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGFLAAAIYDANAYSVTTGDFMGDTLVCMGRKCYFWTFVWWGGISVLGLASSVLLFLRTKHAYDHFERHRSRISAQSLVS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium468g00012 578 SUPERFAMILY MFS general substrate transporter 8 559 IPR036259 -
Vium468g00012 578 Gene3D MFS general substrate transporter like domains 350 565 IPR036259 -
Vium468g00012 578 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 562 - -
Vium468g00012 578 Pfam Nodulin-like 7 254 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium468g00012 Vium-Chr468 99917 105028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium468g00012 1 573 Nodulin-like Gene Family AT1G31470 56.620 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium468g00012 - - gmx:100814771 947.192