Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium468g00003 ATGGGAATATGGTTCTATCTTGCTGCATGTGTTCTTATATGTGTTAAAGTTTTTCTGAAAATGAAACACAAGAAGAGGCTACCACCAAGCCCTCCAACCATACCCATCTTGGGTAACATATTTTGGCTCCTTAAATCCTCCAAAAATTTCGCTGATCTTGAACCTGTTCTTCGCTCTTTACGTTCCAAATATGGTAACATAGTCACCATTCACATAGGCTCCAACCCTTCCATTTTCATAACATGTCAAGAAGCTGCTCACAGAGCACTCGTTAAGAATGGCACAGCTTTTGCCGGTCGACCTTTGGCTCTTCAAACCACACAAGTTTTCTTCCCAAACCAATTCACCGTCACCACTTCTCCATTTGGCCACAACTGGAGAATGATGCGCCAAAATTTAATGCAAGTGATTCAACCTTCTCAGTTGAAATCATATTCTCATTGTCGAAAGTGGGCATTGAATATATTAAAGAGACACATTACGGATGAAATCGAGTCTGGCAACAAGGCTGTACCGATGGATGAACATTTCAACTATGCATTGTATGCTTTATTCTCGTACGTATGTTTCGGAGAGAAATTTGATGAGAGAACCGTGAGGAATATCCAAAGGGTACAGCATGGTTTTCTTCACAACTTCATTAAATTCAATGTGCTGAATTTTGTACCTTTCTTGTCCAAGATTGTGTTCAGAGGGCTGTGGAGAGAGATATTGAAAATTCGTGAAGATCAGGTGAATGTGTTCCTCCCTATCATAAAAGCACGCCAAGAGAAGATAAAGGGGAAGGTTGGTGTTGAAGATGAGAATGGAGAAGAGTTTAGGCCTTATGTGGATACCCTTTTTGATATGAAGCTCCCGAGCAATGGAAGAAAAATGAGGGATGAAGAGTTGGTGAGTATGTGTGCTGAGTTTATGATAGGTGGAACTGATACAACAGTGACCACTTGGGTATGGAGCATGGCGAATCTGGTGAAGTACCAGGACGTGCAAGAGAAACTGTTTGATGAAATCAAGGATGTTGTGGGAGGTGGTGAGGAGATTGAGGAGGAGCATTTGAAAAGGATGCCTTATTTGAAGGCTGTGGTGTTGGAGACTTTAAGGAGACATCCTCCGGGGCATTTTATATTGCCAAGGGCAGTGACAGAGGACACTGTAATGGATGGGTATGAGATACCCAAAAATGCAATGGTGAATTTTCTTGTGGCTGAATTTGGGTGGGATCCTAATGTGTGGGAAGATCCTATGGAGTTTAAACCAGAAAGGTTTTTGAAGCATGGTGGAGATGGTAAGTTTGATTTGAAAGGGACAATGGAGATTAAAATGATGCCTTTTGGAGCAGGGAGGAGAGTTTGTCCTGCAATCAGCATGGCAACTCTTCACCTTGAGTACTTTGTGGCCAATTTGGTGAGGGATTTCAAATGGACTCTTGAAGATGGATGTGAGGTTGACATGACTGAGAAGCAAGCCTTCACTATTGTCATGAAGAATCCATTGAGGCCAATGGTGTCTCCCAGAATCACTTGA 1524 0.4226 MGIWFYLAACVLICVKVFLKMKHKKRLPPSPPTIPILGNIFWLLKSSKNFADLEPVLRSLRSKYGNIVTIHIGSNPSIFITCQEAAHRALVKNGTAFAGRPLALQTTQVFFPNQFTVTTSPFGHNWRMMRQNLMQVIQPSQLKSYSHCRKWALNILKRHITDEIESGNKAVPMDEHFNYALYALFSYVCFGEKFDERTVRNIQRVQHGFLHNFIKFNVLNFVPFLSKIVFRGLWREILKIREDQVNVFLPIIKARQEKIKGKVGVEDENGEEFRPYVDTLFDMKLPSNGRKMRDEELVSMCAEFMIGGTDTTVTTWVWSMANLVKYQDVQEKLFDEIKDVVGGGEEIEEEHLKRMPYLKAVVLETLRRHPPGHFILPRAVTEDTVMDGYEIPKNAMVNFLVAEFGWDPNVWEDPMEFKPERFLKHGGDGKFDLKGTMEIKMMPFGAGRRVCPAISMATLHLEYFVANLVRDFKWTLEDGCEVDMTEKQAFTIVMKNPLRPMVSPRIT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium468g00003 507 Pfam Cytochrome P450 28 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 498 - -
Vium468g00003 507 FunFam Cytochrome P450 family protein 21 507 - -
Vium468g00003 507 Gene3D Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 SUPERFAMILY Cytochrome P450 28 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 CDD CYP77_89 63 499 - -
Vium468g00003 507 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vium468g00003 507 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium468g00003 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium468g00003 Vium-Chr468 40141 41875 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium468g00003 27 505 Cytochrome P450 AT1G64940 45.979 5.88e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium468g00003 K24184 - gmx:102660230 884.789