LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium4667g00006	ATGGTTAAGGCTCATTGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCATCACCTTACTTTAATAGCCCTTGCACCTCAGCAGAGCCCAGTTCGCTGGTTCGTTCAACATACATGAACTCTAGCACTTGCATCTTTCCTGCTGTCAGCATATTTCCCGGGTTCACAGCTCCTGCTATCCCAGATTTGAAGAGTGAGCAGACCAAGGAAGTGCAAGGATTCCTTCAGCATCCCAGTTTGGAACCATGTTTGAACGGAACACATACTGGAGAGGCTATGCAAAATGCATCTTTGCAGAAGAAGTTGCTTGTGTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACCGCTACCCAATTTACTCAAGTTTATGATGTAAACGAAGAAGCACGGGCAACTAATATAGGTCTAAAGCATTGGCCCGTGTACACTTCACCAGAAGAGACTGGTAAGGATCGTGTAGATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTTTTATGATGATGATGATGGTGATGATGATGAGGTAACTAGCACTGGTCATTCTCCGTTGGTTTCTGAAAAAACTTGTGTGATTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGTTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTACCACCACTTGTGGAGAGTGCTAGTTCCGAAAGGCTAGATAAAATGTGTGAGTATGCCAGTGATGTTGAATCAAACTGTTCTAGTAGTTGTGGGGTGTATGCTACAAGGAAAACTAAAGATAACTCAACAGCTGTTGATATTCAATTGAAAAAGGATAAAATCCGTAAACTGGTGAGAGTTCTTGAGAACTTTATTCCAGGAGCAAAAGGAAAGCACCCCCTATTAGTCATCGATGGTACCATTGAGTACTTGGAATCTCTGATGTCCCAAACTGGTACACTGAAATATAACTAA	1038	0.4191	MVKAHWSWPYPQHVAWPSPYFNSPCTSAEPSSLVRSTYMNSSTCIFPAVSIFPGFTAPAIPDLKSEQTKEVQGFLQHPSLEPCLNGTHTGEAMQNASLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVNEEARATNIGLKHWPVYTSPEETGKDRVDNEESEMHEDTEEINALLYSDDFYDDDDGDDDEVTSTGHSPLVSEKTCVIQEQFVDMKEEVVSTDWPNKRQKLIDGGFNRLPPLVESASSERLDKMCEYASDVESNCSSSCGVYATRKTKDNSTAVDIQLKKDKIRKLVRVLENFIPGAKGKHPLLVIDGTIEYLESLMSQTGTLKYN	345

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium4667g00006	345	PANTHER	TRANSCRIPTION FACTOR BHLH145	8	343	IPR037546	-
	Vium4667g00006	345	MobiDBLite	consensus disorder prediction	156	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium4667g00006	Vium-Chr4667	17880	21419	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium4667g00006	83	335	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT5G09460	38.202	2.65e-27	107

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium4667g00006	-		-	gmx:100778385	523.472