Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4667g00005 ATGGTTAAGGCTCATTGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCATCACCTTACTTTAATAGCCCTTGCACCTCAGCAGAGCCCAGTTCGCTGGTTCGTTCAACATACATGAACTCTAGCACTTGCATCTTTCCTGCTGTCAGCATATTTCCCGGGTTCACAGCTCCTGCTATCCCAGATTTGAAGAGTGAGCAGACCAAGGAAGTGCAAGGATTCCTTCAGCATCCCAGTTTGGAACCATGTTTGAACGGAACACATACTGGAGAGGCTATGCAAAATGCATCTTTGCAGAAGAAGTTGCTTGTGTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACCGCTACCCAATTTACTCAAGTTTATGATGTAAACGAAGAAGCACGGGCAACTAATATAGGTCTAAAGCATTGGCCCGTGTACACTTCACCAGAAGAGACTGGTAAGGATCGTGTAGATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTTTTATGATGATGATGATGGTGATGATGATGAGGTAACTAGCACTGGTCATTCTCCGTTGGTTTCTGAAAAAACTTGTGTGATTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGTTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTACCACCACTTGTGGAGAGTGCTAGTTCCGAAAGGCTAGATAAAATGTGTGAGTATGCCAGTGATGTTGAATCAAACTGTTCTAGTAGTTGTGGGGTGTATGCTACAAGGAAAACTAAAGATAACTCAACAGCTGTTGATATTCAATTGAAAAAGGATAAAATCCGTAAACTGGTGAGAGTTCTTGAGAACTTTATTCCAGGAGCAAAAGGAAAGCACCCCCTATTAGTCATCGATGGTACCATTGAGTACTTGGAATCTCTGATGTCCCAAACTGGTACACTGAAATATAACTAA 1038 0.4191 MVKAHWSWPYPQHVAWPSPYFNSPCTSAEPSSLVRSTYMNSSTCIFPAVSIFPGFTAPAIPDLKSEQTKEVQGFLQHPSLEPCLNGTHTGEAMQNASLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVNEEARATNIGLKHWPVYTSPEETGKDRVDNEESEMHEDTEEINALLYSDDFYDDDDGDDDEVTSTGHSPLVSEKTCVIQEQFVDMKEEVVSTDWPNKRQKLIDGGFNRLPPLVESASSERLDKMCEYASDVESNCSSSCGVYATRKTKDNSTAVDIQLKKDKIRKLVRVLENFIPGAKGKHPLLVIDGTIEYLESLMSQTGTLKYN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4667g00005 345 PANTHER TRANSCRIPTION FACTOR BHLH145 8 343 IPR037546 -
Vium4667g00005 345 MobiDBLite consensus disorder prediction 156 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4667g00005 Vium-Chr4667 17769 21419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4667g00005 83 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 38.202 2.65e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4667g00005 - - gmx:100778385 523.472