Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4663g00002 ATGGCCAACAAGGGAAGTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAGTGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTATAATGGAGATATTAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTAGTTTGCCTGGAAAAGCTCTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCATATCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTCATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCACAGGGTGTTTGATGCAATGGCTCTGGCGAATCCATGTTCCCTTGACAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGATTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGGTATGCATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAAAGAGGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACACTTTGTGCTATTTTGGGGAACTCGTCAACATTTAAGGCAAACCCTTATGCCGGTAACTCAAACTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGTAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGATTTCATGGGAAAAACATTAACTGATAAGAAAAGAGAAGTTAAAAACTTCCAGGTTCTCAAATCCTTTGCTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATGCTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAAATGGACACAGAACTAGAAAGACTTGTTTGTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATGTTTGA 1956 0.41 MANKGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSSLPGKALEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVFDAMALANPCSLDKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMHGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDDFMGKTLTDKKREVKNFQVLKSFAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADAEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERLVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4663g00002 651 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 202 IPR025610 -
Vium4663g00002 651 PANTHER TRANSCRIPTION FACTOR TT8 11 646 - -
Vium4663g00002 651 Coils Coil 494 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4663g00002 Vium-Chr4663 3785 8954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4663g00002 15 647 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.051 4.66e-117 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4663g00002 - - gmx:100783746 1144.41