Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4663g00001 ATGGCCAACAAGGGAAGTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAACTTGCTGTTGCAGTGAGAAGCATTCAGTGGAGTTATGGGATCTTCTGGGCACCTTCAACCACTGAAGAAAGGGTGCTGGAATGGAGAGAAGGGTACTATAATGGAGATATTAAGACAAGAAAAACTGTTCAAGCCATGGAATTGGAAATGAAGGCTGATAAAATAGGTCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCACAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGATCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCGGTCACAATCAAAGTTTGCCTGGAAAAGCTCTGGAAATTGGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCATATCAGAAAGGCGTTATTGAGATAGGTTCAACTGAACTGGTTATCGAGGACCCTAATCTCATCCAACATGTGAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGTTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCACAGGGTGTTTGATGCAATGGCTCTGGCGAATCCATGTTCCCTTGACAAGAAAATCAAATTTGATAATCATGATCCTGTCAATGGATTAGAAGGTGATAACAATGAAGATTCTAACATGGATTTTCCTGATGGTTGTGAGCACCATTACCCTATGGAATCCATGATTGATGGTATGCATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGCATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAACTTCAAGATTGCTATAAACCAAAAAGAGGCTTCTTGGATGCTGGAGCTGATGAAGACTTGTGCTACATCAGAACACTTTGTGCTATTTTGGGGAACTCGTCAACATTTAAGGCAAACCCTTATGCCGGTAACTCAAACTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGTAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTTTTCCCGCAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGGTGATGATTTCATGGGAAAAACATTAACTGATAAGAAAAGAGAAGTTAAAAACTTCCAGGTTCTCAAATCCTTTGCTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAAGTACTTGAAAAGGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTGCAGATGCTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCTGATAACTATGGCACCAGAAAGATTTGCATGGGAGTGAAACCTTGGATGAACAAGAGGAAGGCCAGTGGTTTTGATGAAATGGACACAGAACTAGAAAGACTTGTTTGTGAAGAAGCAAAGGCATTGGATGTGAAAGTGAAGGTAAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCACTGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATGTTTGA 1953 0.4101 MANKGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQAMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFGHNQSLPGKALEIGDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVFDAMALANPCSLDKKIKFDNHDPVNGLEGDNNEDSNMDFPDGCEHHYPMESMIDGMHGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRGFLDAGADEDLCYIRTLCAILGNSSTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYFSRKSQKESDRMEWTSKLENAGDDFMGKTLTDKKREVKNFQVLKSFAPSSISEEEKISILGDTIKYLKRLETRVEELESYMEVADAEARTRRKCPDVLEQMSDNYGTRKICMGVKPWMNKRKASGFDEMDTELERLVCEEAKALDVKVKVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTSDGVLSLTLKSKFRGAATAPLRMIKEALWKAYGNV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4663g00001 650 Coils Coil 493 513 - -
Vium4663g00001 650 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 201 IPR025610 -
Vium4663g00001 650 PANTHER TRANSCRIPTION FACTOR TT8 11 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4663g00001 Vium-Chr4663 3785 8954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4663g00001 15 646 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.110 6.14e-119 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4663g00001 - - gmx:100783746 1149.04