Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium465g00022 ATGTCCTCCTCTCTCATGCCAAACCCAACCGATCGCTCGCGTGACTCTCACCGCCCAAAGAAGAAGAAGAAATCCCCCGCCAAACCCCAACCCCACCAAGACCACTCCCACGCCACATGGAAAACCCACGCGCAGCAGAACCTATATTCCTCCAAGCTCCACCAGGCCCTTGCGCGTGTCAACATCTCCGCGGACACGCCCCGCCGTGGCCGGGCCGTCCGTGAGGCCGCCGACAGAGTCCTCGCCGTCGCCGCCCGCGGGAGGACGCGCTGGAGCCGCGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCAGGAAGACACCGCACAGGCGACCCAAGGTGGTTGGCCCGCCCCGCCCCAAGAAGCCCCGCTTCAGCGTCCTCCGCCTCAAGGGAAAAACCCTTCCCTCCGTTCAGCGCAAAGTTAGAGTCCTCGGACGGTTGGTTCCCGGTTGCAGAAAAGAACCCCTTCCGATCATTCTCGAAGAAGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGGCGGATCTCGCTCGATTACTCCTGGGCTCATCCTCTTCTTCCGCCGCCGCATCCACCTCCGCGCCGTCGAGTTGA 609 0.6289 MSSSLMPNPTDRSRDSHRPKKKKKSPAKPQPHQDHSHATWKTHAQQNLYSSKLHQALARVNISADTPRRGRAVREAADRVLAVAARGRTRWSRAILTNRLKLKFRKTPHRRPKVVGPPRPKKPRFSVLRLKGKTLPSVQRKVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMADLARLLLGSSSSSAAASTSAPSS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium465g00022 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 186 IPR036638 GO:0046983
Vium465g00022 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 188 IPR044660 GO:0006355
Vium465g00022 202 CDD bHLH_AtIBH1_like 127 178 IPR044549 GO:0006355
Vium465g00022 202 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium465g00022 Vium-Chr465 188485 189559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium465g00022 37 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.367 1.74e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium465g00022 - - gmx:100792237 257.299