Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4654g00024 ATGGGGCTCTTACAGGAGAAGCTGTCCTTGTTCTATAAGAGCCGGTGGCTTGTGTTCGTCGCCGCAATGTGGTTGCAGTCATGGGCGGGTATCGGCTACCTCTTCGGGAGCATATCGCCGGTAATCAAGAGCTCCCTCGGTTACAACCAGAAGCAGCTCGCCATGTTGGGTGTTGCCAAGGACCTCGGCGACGCTGTTGGCTTCATGACGGGGCTGCTCTGTGAGTTGTTACCTATCTGGGGTGCTCTTCTTGTTGGTGCTGCTTTGAATCTCATCGGTTATGGCTGGGTCTGGTTGATTGTAACTGCTCAAGTTCCAGTTTTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCAGGGTTGAGTGGTGCAATCTTGACACAGATATATGTATTATTCCATTCCCCTGATCACGCATCATTAATATTTATGGTTGCTGTTGGTCCTGCATTGGTAGGAATAGGTCTTATGTTCCTTGTTAGGCCTGTTGGGGGTCACAAACAAGTCCGGCCAACAGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTTCTCTTGGCTGTTTATTTGTTGGGAGTTATGGTTGTCCAAGATCTAGTTCCAGTGAGTGAAACTGTAGTATCTGTATTCACAATTATTCTCTTGCTGATCCTTGTTATCCCAATTGTTATTCCCATTATGTTGAGTTTTGGCCCTGAGCCAAGAAATCCAGATGAAGAGTTCCTTCTTCCAGAACCACATAATAAAGAACCAGGGAAGTCTCAGTTGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAAAAACGTATAGCACACTTACAACAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCGCACAGAGGGGAAGATTTCACCTTGACACAAGCATTAATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCCGGATCTGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGTCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGGGGCAATGTATGTTGGCACGTTACTGGTTGGACTTGGTTACGGGGCTCATTGGGCAATTGTTCCAGCCACTGCCTCAGAGTTGTTTGGTCTCAGAAACTTTGGTGCACTGTACAATTTCATCACTCTGGCAAACCCTGCAGGAACACTGGTCTTCTCTAG 1428 0.4643 MGLLQEKLSLFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCELLPIWGALLVGAALNLIGYGWVWLIVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYVLFHSPDHASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPTDGKCFTFVYGVCLLLAVYLLGVMVVQDLVPVSETVVSVFTIILLLILVIPIVIPIMLSFGPEPRNPDEEFLLPEPHNKEPGKSQLDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRGNVCWHVTGWTWLRGSLGNCSSHCLRVVWSQKLWCTVQFHHSGKPCRNTGLL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4654g00024 475 Pfam Nodulin-like 15 262 IPR010658 -
Vium4654g00024 475 MobiDBLite consensus disorder prediction 274 292 - -
Vium4654g00024 475 SUPERFAMILY MFS general substrate transporter 11 202 IPR036259 -
Vium4654g00024 475 SUPERFAMILY MFS general substrate transporter 212 425 IPR036259 -
Vium4654g00024 475 MobiDBLite consensus disorder prediction 274 294 - -
Vium4654g00024 475 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4654g00024 Vium-Chr4654 250788 254205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4654g00024 5 423 Nodulin-like Gene Family AT5G14120 73.460 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4654g00024 - - gmx:100796700 761.911