Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4654g00023 ATGGGGCTCTTACAGGAGAAGCTGTCCTTGTTCTATAAGAGCCGGTGGCTTGTGTTCGTCGCCGCAATGTGGTTGCAGTCATGGGCGGGTATCGGCTACCTCTTCGGGAGCATATCGCCGGTAATCAAGAGCTCCCTCGGTTACAACCAGAAGCAGCTCGCCATGTTGGGTGTTGCCAAGGACCTCGGCGACGCTGTTGGCTTCATGACGGGGCTGCTCTGTGAGTTGTTACCTATCTGGGGTGCTCTTCTTGTTGGTGCTGCTTTGAATCTCATCGGTTATGGCTGGGTCTGGTTGATTGTAACTGCTCAAGTTCCAGTTTTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCAGGGTTGAGTGGTGCAATCTTGACACAGATATATGTATTATTCCATTCCCCTGATCACGCATCATTAATATTTATGGTTGCTGTTGGTCCTGCATTGGTAGGAATAGGTCTTATGTTCCTTGTTAGGCCTGTTGGGGGTCACAAACAAGTCCGGCCAACAGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTTCTCTTGGCTGTTTATTTGTTGGGAGTTATGGTTGTCCAAGATCTAGTTCCAGTGAGTGAAACTGTAGTATCTGTATTCACAATTATTCTCTTGCTGATCCTTGTTATCCCAATTGTTATTCCCATTATGTTGAGTTTTGGCCCTGAGCCAAGAAATCCAGATGAAGAGTTCCTTCTTCCAGAACCACATAATAAAGAACCAGGGAAGTCTCAGTTGGATTCTGATGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAAAAACGTATAGCACACTTACAACAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCGCACAGAGGGGAAGATTTCACCTTGACACAAGCATTAATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCCGGATCTGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGTCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGAGATTATGCATATCCAAGACCAATTGCATTGGCTGTATTTCAACTCATTATGACTGTTGGACATCTTTTCATTGGTATGGGATGGCCAGGGGCAATGTATGTTGGCACGTTACTGGTTGGACTTGGTTACGGGGCTCATTGGGCAATTGTTCCAGCCACTGCCTCAGAGTTGTTTGGTCTCAGAAACTTTGGTGCACTGTACAATTTCATCACTCTGGCAAACCCTGCAGGAACACTGGTCTTCTCTAGTCTCATTGCCAGCACCATCTACGATTCTGAAGCAGAGAAACAACACCCCCAAAGTATGGGATCACTGTTGTTGCATTTGCCAAATGCTGCTGCTGAGTCTCTCAAGTGTGAAGGAAGCGTATGCTTTTTCCTAACTTCCATGATCATGGCAGTATTATGCGTTGTTGCAGCAGGGCTATGCACGGTTCTAGTGTTAAGAACAAGGATTGTTTATGCCAACCTATATGGAAAAACTTCTTCTAGTAGACTTCGATTATGA 1776 0.4555 MGLLQEKLSLFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCELLPIWGALLVGAALNLIGYGWVWLIVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYVLFHSPDHASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPTDGKCFTFVYGVCLLLAVYLLGVMVVQDLVPVSETVVSVFTIILLLILVIPIVIPIMLSFGPEPRNPDEEFLLPEPHNKEPGKSQLDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRDYAYPRPIALAVFQLIMTVGHLFIGMGWPGAMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPQSMGSLLLHLPNAAAESLKCEGSVCFFLTSMIMAVLCVVAAGLCTVLVLRTRIVYANLYGKTSSSRLRL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4654g00023 591 CDD MFS_Mch1p_like 14 563 - -
Vium4654g00023 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 578 - -
Vium4654g00023 591 MobiDBLite consensus disorder prediction 274 294 - -
Vium4654g00023 591 MobiDBLite consensus disorder prediction 274 292 - -
Vium4654g00023 591 Gene3D MFS general substrate transporter like domains 359 574 IPR036259 -
Vium4654g00023 591 SUPERFAMILY MFS general substrate transporter 212 574 IPR036259 -
Vium4654g00023 591 SUPERFAMILY MFS general substrate transporter 11 202 IPR036259 -
Vium4654g00023 591 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4654g00023 Vium-Chr4654 250390 254204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4654g00023 5 586 Nodulin-like Gene Family AT5G14120 71.111 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4654g00023 - - gmx:100796700 1035.4