Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4654g00022 ATGAAGATGATCACTAGGATGGTTCTAATGGCTTTTCTGTTGGCTTTCACGATGCTTATATCTAAGGGGGAAGGTCAATTATCAGAGAATTTCTATAGCTCGTCTTGTCCAAACGTGGAATCCATCGTGTCCCAAGCAGTTACAAACAAGTTTACTCAGACCATCACAACTGGACAAGCAACCCTGCGTCTCTTTTTCCATGATTGCTTTGTCGAGGGATGTGATGCCTCTGTGATAATTGCGTCTCCAAATGGGGACGCAGAAAAGGATTACACGGAAAATCTATCGCTACCAGGAGATGGGTTTGACACTGTGATCAAGGCAAAGCAAGCAGTGGAAGCTTCATGCCCCGGTGTGGTCTCATGCGCAGACATTTTGGCTCTAGCTACCAGAGACGTCATAGGCTTGCTTGGAGGTCCTTCATTCAAAGTAGAGCTTGGACGCCGAGACGGGTTAATTTCGAAGGCATCTCGCGTAGAAGGAAACCTCCCCAAAGCGAGCTTCAACTTGGACCAACTCAACGCGCTTTTCCAGAAGCACGGTCTCACCCAAACGGATATGATAGCCCTCTCCGGGGCCCACACCGTGGGATTCTCGCACTGCGATCAGTTCGCGAACCGTTTATACTCGTTTTCATCGTCCAATTCCGTGGACCCAACTCTGGACGCCACCTACGCTCAGGAACTGATGGCGGGGTGCCCCAGAAACCCCGAACCCACCGTAGCGGTGGCGCTGGACCCGCAAACCCCTGCGGCGTTTGACAACGTCTATTACCAAGACCTGGTGTCGGGAAAAGGGCTACTGAGCTCGGACCAGGTGCTGTTCTCGGACGCCGCGTCGCAGCCCACGGTGGTTCGGTTCGCGAACAACGCTGCGGACTTCAACGAAGCGTTTGTGGCGGCCATCAGGAAGCTGGGAAGGGTTGGAGTGAAGACCGGGAAAGATGGGGAGATAAGGAGAGACTGCACAACCTTCAATTCTTGA 984 0.5254 MKMITRMVLMAFLLAFTMLISKGEGQLSENFYSSSCPNVESIVSQAVTNKFTQTITTGQATLRLFFHDCFVEGCDASVIIASPNGDAEKDYTENLSLPGDGFDTVIKAKQAVEASCPGVVSCADILALATRDVIGLLGGPSFKVELGRRDGLISKASRVEGNLPKASFNLDQLNALFQKHGLTQTDMIALSGAHTVGFSHCDQFANRLYSFSSSNSVDPTLDATYAQELMAGCPRNPEPTVAVALDPQTPAAFDNVYYQDLVSGKGLLSSDQVLFSDAASQPTVVRFANNAADFNEAFVAAIRKLGRVGVKTGKDGEIRRDCTTFNS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4654g00022 327 FunFam Peroxidase 30 175 - -
Vium4654g00022 327 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vium4654g00022 327 Gene3D - 30 326 - -
Vium4654g00022 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Vium4654g00022 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Vium4654g00022 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PANTHER - 7 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 FunFam Peroxidase 164 305 - -
Vium4654g00022 327 Gene3D Peroxidase, domain 2 164 305 - -
Vium4654g00022 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium4654g00022 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4654g00022 Vium-Chr4654 213220 215067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4654g00022 8 326 Peroxidase AT5G14130 63.551 2.67e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4654g00022 K00430 - gmx:100791275 577.4