Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4654g00005 ATGGGAGCATTCATGATCCTCCTTTCCTTGGAGCCCCTCCTCTCTTTCTTCTTCCTCCTCATCCTTTTCTACACCGCACTGGTAGAATTCCGGCGACGGAATAAATTCTCCGGCACAGGTCCGGCTACTTATCCCCTCATCGGATGTCTCATATCCTTCTACAAGAACAAGCACCGTTTGCTAGATTGGTACACTGAGTTACTTGCTCAGTCCCCTACAAACACCATAGTGGTTCAAAGGCTTGGTGCACGTAGAACCATTGTCACTGCAAACCCACAAAATGTTGAGTACATACTGAAGACAAACTTCAACAACTTCCCCAAAGGCAAGCCCTTCACTGAGATCCTTGGTGATTTCCTTGGCCAAGGGATTTTCAACGTGGACGGAGAGCTGTGGCTTACACAGCGCAGATTTGTGAGCCATGAGTTCTCTACCAAGTCCCTGAGGGAGTTTGTCATGCACACGTTGGAGAGGGAAGTGTGTGAGAGGCTTTTGCCGGTGCTGGAGGAGCTGTCTGATGAGAACACGGTGGTTGACTTGCAGGAGTTGCTAGGAAGGTTCTCATTCAATGTGATCTGCAAGTTCACACTGGGAACTGATAGGTGTTGCTTGGACCCTTGTGTCCCTACTTGTTCCCTTGCAAGGGCTTTTGATGTGGCTGCAGAGGTGTCAGCGAGGCGTGGGGCAGCACCTTTGTTCATGATCTGGAGGGTGAAGAGATGGCTTGGTGCTGGATCTGAAGGATTGCTTAGAAAAGCTGTTGGGGAGGTTCAGACCCATGTGATGAGAGTGATTGAGGAGAGGAAGAAGAGAGAGGAGAGTGAAGAAAATTGTGGTGTTGAAGACCTCTTGTCAAGGCTTTTAAGTGCAGGTCATGAGGAGGAGTTGATCAAAGACATGGTGATAAGTTTCATTATGGCAGGGAGGGACACTACTTCAGCAGCTATGACATGGTTCTTCTGGATACTGTCACATTATTCCCACATGGAGAAGCAGATAGTGGAAGAGGCAAAAGGGGTGTTGGATTACGAATCCATGAAGAATTTGAGTTTCTTGAAGGCATGTTTGTGCGAGTCCATGAGGTTGTATCCGCCCGTGGCATGGGACTCCAAGCATGCCAGTGGTGATGATCTGTTGCCAGATGGAACTGTGGTGAAGGCAGGAGATAGGGTCACATATTTTCCCTATGGAATGGGGAGAATGGAAACCTTGTGGGGGAAGGACTGCTTTGAATTTAGACCAGATCGATGGTTTGTGGAACCAGGAAACAGTGAGGGAATAATGTTGAATGAGGTTTCTCCTTTCTTGTTTCCAATTTTTCAGGCTGGTCCAAGGGTGTGTCTTGGCAAAGAAATGGCCTTCATTCAAATGAAGTATGTGGTGGCTTCAATTCTAAGCCGATTCAAGTTTACAATTGTTGGTCCAGAGAGGCCTATATTCGTGCCACTTCTCACGGCACACATGGCTGGTGGCCTAAGAGTATTGGTTTGCAAAAGGGAAAAATCTGAGTGA 1512 0.4775 MGAFMILLSLEPLLSFFFLLILFYTALVEFRRRNKFSGTGPATYPLIGCLISFYKNKHRLLDWYTELLAQSPTNTIVVQRLGARRTIVTANPQNVEYILKTNFNNFPKGKPFTEILGDFLGQGIFNVDGELWLTQRRFVSHEFSTKSLREFVMHTLEREVCERLLPVLEELSDENTVVDLQELLGRFSFNVICKFTLGTDRCCLDPCVPTCSLARAFDVAAEVSARRGAAPLFMIWRVKRWLGAGSEGLLRKAVGEVQTHVMRVIEERKKREESEENCGVEDLLSRLLSAGHEEELIKDMVISFIMAGRDTTSAAMTWFFWILSHYSHMEKQIVEEAKGVLDYESMKNLSFLKACLCESMRLYPPVAWDSKHASGDDLLPDGTVVKAGDRVTYFPYGMGRMETLWGKDCFEFRPDRWFVEPGNSEGIMLNEVSPFLFPIFQAGPRVCLGKEMAFIQMKYVVASILSRFKFTIVGPERPIFVPLLTAHMAGGLRVLVCKREKSE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4654g00005 503 CDD CYP86A 75 492 - -
Vium4654g00005 503 SUPERFAMILY Cytochrome P450 39 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PANTHER CYTOCHROME P450 27 493 - -
Vium4654g00005 503 Gene3D Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4654g00005 503 Pfam Cytochrome P450 40 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4654g00005 Vium-Chr4654 59023 60877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4654g00005 38 502 Cytochrome P450 AT3G01900 58.686 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4654g00005 K20665 - gmx:100786130 847.04