Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4645g00009 ATGGAAATGATGGTTTCAGATTGTGAACAACAAAGGAAGATAGAGATTAAGGCAGGGGAGACTGGAAAGCGGGGACCTGACAAATTGGGAGTGAAACAAGATAAAAACATTGGTAATGAATCTTTGACATGTGAGAAAGAGAACAGCAAGAGAATGTCAGAGATTTGGCATGTTCTGAAGAAATCACTTCATTGCAGATCTCATTCATCAGAAGTTCATGATCCCCAGGCAAAAAGAATAGATCAGAGAAAAAAGGATGAGAGAAATAAAAGACAGTCAAAACACCAACTTAGCCATGAAATTTTCCTTGATAGATATAGTGGTGAGATTAAGATTTTTCCATGTTATCCTACAGAAGAACCTCCTTCTCATTCTCCAGCAAAATCCAAGCTAACTATAGTTTCATCAGAAACACTTTGTGTTGATTGTGATGAATGTGTTGTTTTCTCAAAGAAAAAGGTTCCAGTGAAAGATTCTAATGATCCCCCAATATCAGCACGTCATCGTGAATGTGAAGACAAAATCAAATCTAGTGACACTGTTGAAGAACAGGGAAATTTCCATCTACATTCAGTTTCATGTGAGAATCTTTGGAAGATTTGGAAGAATATTGATGTCACTTTTGTAACTTTGGCAGGGATTGAACATTCTCTTGACACTGTATCTGGTTTAGTGATCCAACTTGAGAGAGAAGATTCATCGAGTAAGATCATCGAACAAATATGCGAAGGTAACTTAACGGAAAGCAATGCAACAGAGATTGAATGTGTTATGAGAGTGCAGAGCAAGCAAGAAACGTTTGCATGGTATGAGGAATGTAGGGAATTGGTAAGGGTGAAAGCCAAAAACCTAGAAAAGGAGCAGCCGAGATGCTTGGTTGATGGAAATGAACTGCTCAGATTTCATGGCACAACACTTGCATGTTCACTTGGTTCAAACGCTTCCTCTTCTACCCTTTGCACTTTAGACCACTGTGGTGTCTGTCAAATTCTGAAGCATGGTTTTTACTCCAACCAAGAACTATTTAATGGTGCACTTGGGGTTTGCACCTCTTCTAGCAGTGCAAAAGCTATTCATTCAATTTGCTCACCCAATAACAAATCTGTGACGAGAAAATGTGTTATGCTGTGCAGAGTGATAGCTGGGAGAATCCATAATCCTCTACAAGAGATTGAGGAAATCACTCATACTGGGTTTGATTCTTTGGTAAAGAAAATGAGAGACCACTCAGAGATTGAAGAACTCGTTGTGTTAAATCCTAGAGCTGTGCTCCCTTGCTTTTTGGTAATCTACAATCTTTGA 1302 0.3886 MEMMVSDCEQQRKIEIKAGETGKRGPDKLGVKQDKNIGNESLTCEKENSKRMSEIWHVLKKSLHCRSHSSEVHDPQAKRIDQRKKDERNKRQSKHQLSHEIFLDRYSGEIKIFPCYPTEEPPSHSPAKSKLTIVSSETLCVDCDECVVFSKKKVPVKDSNDPPISARHRECEDKIKSSDTVEEQGNFHLHSVSCENLWKIWKNIDVTFVTLAGIEHSLDTVSGLVIQLEREDSSSKIIEQICEGNLTESNATEIECVMRVQSKQETFAWYEECRELVRVKAKNLEKEQPRCLVDGNELLRFHGTTLACSLGSNASSSTLCTLDHCGVCQILKHGFYSNQELFNGALGVCTSSSSAKAIHSICSPNNKSVTRKCVMLCRVIAGRIHNPLQEIEEITHTGFDSLVKKMRDHSEIEELVVLNPRAVLPCFLVIYNL 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4645g00009 433 MobiDBLite consensus disorder prediction 67 96 - -
Vium4645g00009 433 SUPERFAMILY ADP-ribosylation 226 432 - -
Vium4645g00009 433 MobiDBLite consensus disorder prediction 15 34 - -
Vium4645g00009 433 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 56 431 - -
Vium4645g00009 433 Gene3D - 218 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4645g00009 Vium-Chr4645 210782 214461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4645g00009 225 430 C2H2 Transcription Factor Family AT5G54630 46.759 6.94e-56 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4645g00009 - - vum:124838708 885.56