Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4641g00018 ATGGATCTTGAGTCTGTTATCCGTAGGAACACAATTAAGGAAGAATCATGGAAGACAGTGTTAACTTTGGCTTATCAAAGCTTGGGGGTTGTGTATGGAGACTTGAGCACTTCCCCACTTTACGTTTACAAAAGCACTTTCGCTGAGGATATTCAGCATTCAGATACCAATGAAGAAATCTATGGGGTGTTGTCTTTTGTTTTCTGGACTCTCACGCTGATTCCACTGCTCAAGTATGTGTTCATTGTGCTGAGAGCTGATGACAATGGCGAGGGAGGGACCTTTGCTCTCTACTCCTTGCTCTGCCGCCACGCTCGTGTTAGCTTGTTGCCTAACACTCAGCTTGCGGATGAGGACTTAACAGAGTACACCATAGACAATGGAACTGTTCCTATCAACAAGAAAAATGTTGGTTTGGGCTTGAAGAGCTTGTTGGAGAAATACAGGGTGCTGCAAAGGGTGCTGCTTGTTCTCGCCTTGATAGGAACTTGCATGGTTATTGGGGATGGAGTGCTCACACCAGCAATTTCTGTTTTTTCTGCTGTGTCAGGCTTGGAGCTTTCCATGTCTAAAGAACAACACAGATATGTGGAGGTTCCAGTGGCTTGTGTAATACTGGTGTTTTTGTTTGCCCTTCAACATTATGGCACTCACCGTGTGGGATGTCTCTTTGCACCTGTTGTCTTGACCTGGCTACTTTGTATCAGTGCTATTGGTATTTATAACATCTTCCATTGGAATCCACATGTTTATCAAGCTCTCTCCCCATATTACATGTTCAAATTTCTGAAAAAGACTCAAAAGGGAGGATGGATGTCCTTGGGTGGAATTCTACTTTGTATAACAGGTTCAGAAGCCATGTATGCTGACTTAGGACACTTTTCACAATTGTCAATTAAGATTGCATTCACCTTTTTGGTGTACCCTTCCTTAATCCTAGCATATATGGGACAAGCTGCATATCTTTCAAGGCATCATTCCCTTGAAAGTGATTATCGAATTGGGTTCTATGTATCAGTACCTGTAAAACTTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACAGGAACTTTCTCAATAATCAAGCAATGTTCTGCTTTGGGATGTTTCCCCAAAGTCAAAATCATCCACACATCATCCAAGACTCATGGCCAGATTTACATTCCTGAGATCAACTGGAGTTTGATGCTGCTTTGCCTGGCTATTACAGTTGGATTTAGAGATACTAAACGCATGGGAAATGCAGCAGGCTTGGCTGTTATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTAGTTATAGTCTTATGTTGGCACAAAAGCTTTTTGCTGGCAATTTGCTTCATATTGTTCTTTGGCTCCATTGAAGCACTCTATTTCTCAGCATCCCTGATCAAGTTCCTTGAGGGGGCTTGGGTCCCCATTGCCCTCTCATTCATCTTTCTCATTTCCATGTATGTATGGCATTATGGCACAATAAAGAAGTATGAGTTTGATGTTCAGAATAAGGTTCCAATCAACTGGCTACTCAGTTTAGGCCCCACTCTAGGCATTGTCAGAGTCAAGGGAATTGGCCTCATACACACTGAGCTAGTATCTGGGATCCCAGCTATTTTCTCCCACTTTGTGACCAATCTCCCTGCCTTCCACCAAGTTGTTATCTTCCTCTGCATCAAGTCTGTCCAAGTGCCACATGTCAGACAAGAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAAGGAGTATAGGCTTTACAGGTGCATAGCCAGGTATGGCTACCGTGACATTCACAAGGATGACATGGAGTTTGAGAAGGATCTTGTGTGCAGCATAGCAGAATTCATCAGATCAGACACCTCAGAATATGGCCTAGGATTGGGAAGTTTTGAAGAAGACACAAAGATGACAGTTGTTGGGACTTCAGCATCAAACTTAGAGGGTTCAATAAGGATGTCTGAAGATGATCAACAACAAGATTCTCAGATGGAAGGCCCCTCAGAATTGATGGAAGTTAAGCCTTCTCCAGAGAAAGTGAGGAAGAGAGTGAGGTTTGTTGTGCCAGACAGTCCACAGATTGATTTTGAAACAAGAGAGGAGTTGCTTGAGCTAATGGAAGCAAAAGAGGCTGGAATGGCATTCATTCTTAGTCACTCATATGTTAGAGCAAAAAGTGGATCAAGCTGGTTGAAAAAAGTTGTCATCAATTATGGATATGATTTCTTAAGAAGAAACTCTAGAGGACCAACATATGCTTTAAGCATACCTCATGCATCTACCTTAGAGGTGGGCATGATCTACCATGTATGA 2340 0.4286 MDLESVIRRNTIKEESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSDTNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPNTQLADEDLTEYTIDNGTVPINKKNVGLGLKSLLEKYRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVILVFLFALQHYGTHRVGCLFAPVVLTWLLCISAIGIYNIFHWNPHVYQALSPYYMFKFLKKTQKGGWMSLGGILLCITGSEAMYADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSRHHSLESDYRIGFYVSVPVKLRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKTHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKSFLLAICFILFFGSIEALYFSASLIKFLEGAWVPIALSFIFLISMYVWHYGTIKKYEFDVQNKVPINWLLSLGPTLGIVRVKGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVQVPHVRQEERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSDTSEYGLGLGSFEEDTKMTVVGTSASNLEGSIRMSEDDQQQDSQMEGPSELMEVKPSPEKVRKRVRFVVPDSPQIDFETREELLELMEAKEAGMAFILSHSYVRAKSGSSWLKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4641g00018 779 MobiDBLite consensus disorder prediction 660 683 - -
Vium4641g00018 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4641g00018 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium4641g00018 779 Pfam K+ potassium transporter 25 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4641g00018 Vium-Chr4641 142448 149620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4641g00018 1 779 Inorganic Solute Cotransporters AT5G14880 76.329 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4641g00018 K03549 - gmx:100793387 1472.6