Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4632g00005 ATGTCTGGAAGAGAATTGGGAGTGCTTAATGCACTCGATTTGGCGAAGACGCAATGGTACCACTTCACAGCTATTGTGATTGCTGGAATGGGATTCTTTACCGATGCCTATGATCTCTTCTGTATTTCTCTTGTCACCAAATTGCTGGGGAGGATATATTACACAGACATATCCAAACCAAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCAGTGACTGGTGTAGCACTGTGCGGTACTTTGGCTGGCCAGCTTTTCTTTGGATGGCTTGGTGACAAGTTGGGAAGGAAAAAGGTTTATGGCTTAACTCTTATGCTGATGGTAGTGTGTTCCCTTGCCTCGGGGCTCTCTTTTGGAGATACCCCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTATCGGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGAATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACGATCTTCCCAGTTACGCAGAAAACCCAGAAGGATCAATAGTTCATTCCCTTGATTATGTTTGGCGTATCATTTTGATGTTTGGTGCAGTCCCAGCTGCGGTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACCGCCCTCGTAGCCAGGAATGCAAAACAAGCTGCTTCAGACATGTCCAAGGTGCTTCAAGTTGAGATTGAAGCTGAAGAGGATAAGTTGAACCACATTGTCGAGAGTGAAAACCAAAGTTATGGCTTGTTCAGCAAGGAATTTGCCAAACGCCATGGGTTGCACTTGCTTGGAACCACAGTAACATGGTTTTTGTTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCCATTGGATGGCTCCCTCCTTCACAAGAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTCATAGCACTTTGCAGCACCGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGACGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATACCTTACAATCACTGGACCAAGAGAGAAAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACCTTTTTTTTCTCCAATTTTGGTCCAAATGCCACCACGTTTGTTGTACCAGCAGAGATTTTCCCAGCAAGGTTAAGATCCACCTGTCATGGAATCTCAGCTGCAGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAGAGTACGGACCCCAAAAAGGTTGATCACGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTGTGCTTGGTGTGGTCAACTTCTTAGGAATGTTATTCACCTTCTTAGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGAAGGTCCTGAGGCTGTAGAGATGGCAGGGTCTGCTAGGACGGTTCCAGTTTAA 1611 0.4575 MSGRELGVLNALDLAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDISKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSLASGLSFGDTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYDLPSYAENPEGSIVHSLDYVWRIILMFGAVPAAVTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVEIEAEEDKLNHIVESENQSYGLFSKEFAKRHGLHLLGTTVTWFLLDIAFYSQNLFQKDIFSAIGWLPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWTKRENRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTDPKKVDHGYPTGIGVKNSLIVLGVVNFLGMLFTFLVPESKGKSLEELSGENEEGPEAVEMAGSARTVPV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4632g00005 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 512 - -
Vium4632g00005 536 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium4632g00005 536 Gene3D MFS general substrate transporter like domains 271 530 IPR036259 -
Vium4632g00005 536 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Vium4632g00005 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Vium4632g00005 536 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Vium4632g00005 536 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vium4632g00005 536 CDD MFS_PhT 25 507 - -
Vium4632g00005 536 MobiDBLite consensus disorder prediction 512 536 - -
Vium4632g00005 536 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4632g00005 Vium-Chr4632 42059 45511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4632g00005 1 536 Inorganic Solute Cotransporters AT2G38940 79.291 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4632g00005 K08176 - gmx:100792177 994.956