Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4632g00003 ATGGGTGGGCAATCTCTGCATGTGCTTAATGCACTGGATGTTGCTAAGACACAATGGTATCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTCTTCACTGATTCTTATGACCTGTTCTGCATATCCCTTGTCACCAAATTACTTGGCCGCATATACTATACTGAAGGCCATGATAAGCCGGGTTCTCTGCCAGCAAATGTTTCAGCTGCCATCAATGGTGTCGCATTCTGTGGATCCCTTGCAGGCCAACTTTTCTTTGGGTGGCTTGGTGACAAAATGGGAAGGAAGCGTGTCTACGGGATGACCCTTATGCTCATGGTCGTAAGTTCAATTGCTTCTGGTCTTTCCTTTGGCAAAGACCCAAAAGCTGTCATGGCTACCCTTTGCTTCTTCCGCTTCTGGCTTGGATTTGGCATTGGTGGAGACTACCCTCTTTCCGCCACCATCATGGCTGAGTATGCCAACAAGAAGACTCGTGGAGCGTTCATAGCTGCTGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCCTGGTTGCAATAGTAGTGTCAGCTGCTTTCGGTGCTCTCTACCCTGCTCCAACATTCCAGGTCAACCCACTTCTGTCCACAGTGCCACAAGCTGATTACGTTTGGAGGATAATCTTGATGTTTGGTGCAATCCCTGCTGTGATCACATACTATTGGCGCATGAAAATGCCCGAGACTGCGAGATACACTGCCTTGGTTGCCAAGAATACGAGGCAAGCTGCTGCAGATATGTCAAAGGTGTTGCAAGTTGAGATAGAAGTGATGTCTGGAAGAGAATTGGGAGTGCTTAATGCACTCGATTTGGCGAAGACGCAATGGTACCACTTCACAGCTATTGTGATTGCTGGAATGGGATTCTTTACCGATGCCTATGATCTCTTCTGTATTTCTCTTGTCACCAAATTGCTGGGGAGGATATATTACACAGACATATCCAAACCAAAGCCTGGTGTTCTTCCTCCTAATGTGCAAGCTGCAGTGACTGGTGTAGCACTGTGCGGTACTTTGGCTGGCCAGCTTTTCTTTGGATGGCTTGGTGACAAGTTGGGAAGGAAAAAGGTTTATGGCTTAACTCTTATGCTGATGGTAGTGTGTTCCCTTGCCTCGGGGCTCTCTTTTGGAGATACCCCAAAGGGTGTCATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGCTTTGGGATTGGTGGTGACTACCCTCTATCGGCTACAATCATGTCTGAATATGCCAACAAAAAGACTCGAGGGGCATTCATTGCTGCAGTGTTTGCCATGCAGGGATTTGGAATCTTGGCTGGTGGAATAGTTGCCTTGATTGTGTCATCTGCATATGACCACAAATACGATCTTCCCAGTTACAAAGAAAACCCAGAAGGATCAATAGTTCATTCCTTTGATTATGTTTGGCGTATCATTTTGATGTTCGGTGCAGTTCCAGCTGCGGTTACCTACTACTGGCGTATGAAAATGCCAGAGACAGCTCGTTACACGGCCCTTGTAGCCAGGAATGCAAAACAAGCTGCTTCAGACATGTCCAAGGTGCTGCAAGTTGAGATTGAAGCTGAAGAGGATAAGTTGAACCACATTGTTGAGAGTGAAAACCAAAGGTATGGCTTGTTCAGCAAGGAATTTGCCAAACGCCATGGGTTGCACTTGCTTGGAACCACAGTAACATGGTTTTTGTTGGACATTGCCTTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCCATTGGATGGCTCCCTCCTTCACAAGAAATGAATGCAATCCATGAAGTTTATAGGATTGCAAGAGCACAAACACTCATAGCACTTTGCAGCACCGTGCCGGGGTACTGGTTTACCGTGGCCTTTATTGATTACATGGGACGTTTCGCCATCCAATTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTCTTGCCATACCTTACAATCACTGGACCAAGAGAGAAAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACCTTTTTTTTCTCCAATTTTGGTCCAAATGCCACCACGTTTGTTGTACCAGCAGAGATTTTCCCAGCAAGGTTAAGATCCACCTGTCATGGAATCTCAGCTGCAGCAGGAAAGGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAGAGTACGGACCCCAAAAAGGTTGATCACGGTTACCCAACTGGTATTGGGGTTAAGAACTCTCTCATTGTGCTTGGTGTAGTCAACTTCTTAGGAATGTTATTCACCTTCTTAGTGCCAGAATCAAAGGGAAAATCACTGGAAGAGTTGAGTGGGGAGAATGAAGAAGGTCCTGAGGCTGTAGAGATGGCAGGGTCTGCTAGGACGGTTCCAGTTTAA 2409 0.4624 MGGQSLHVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYTEGHDKPGSLPANVSAAINGVAFCGSLAGQLFFGWLGDKMGRKRVYGMTLMLMVVSSIASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMAEYANKKTRGAFIAAVFAMQGFGILAGGLVAIVVSAAFGALYPAPTFQVNPLLSTVPQADYVWRIILMFGAIPAVITYYWRMKMPETARYTALVAKNTRQAAADMSKVLQVEIEVMSGRELGVLNALDLAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDISKPKPGVLPPNVQAAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSLASGLSFGDTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAYDHKYDLPSYKENPEGSIVHSFDYVWRIILMFGAVPAAVTYYWRMKMPETARYTALVARNAKQAASDMSKVLQVEIEAEEDKLNHIVESENQRYGLFSKEFAKRHGLHLLGTTVTWFLLDIAFYSQNLFQKDIFSAIGWLPPSQEMNAIHEVYRIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYNHWTKRENRIGFVVMYSLTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSTDPKKVDHGYPTGIGVKNSLIVLGVVNFLGMLFTFLVPESKGKSLEELSGENEEGPEAVEMAGSARTVPV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4632g00003 802 FunFam Probable inorganic phosphate transporter 1-5 20 255 - -
Vium4632g00003 802 MobiDBLite consensus disorder prediction 778 802 - -
Vium4632g00003 802 SUPERFAMILY MFS general substrate transporter 12 242 IPR036259 -
Vium4632g00003 802 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 287 777 - -
Vium4632g00003 802 Pfam Sugar (and other) transporter 25 258 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium4632g00003 802 Pfam Sugar (and other) transporter 291 780 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium4632g00003 802 SUPERFAMILY MFS general substrate transporter 277 781 IPR036259 -
Vium4632g00003 802 CDD MFS_PhT 291 773 - -
Vium4632g00003 802 ProSiteProfiles Major facilitator superfamily (MFS) profile. 290 774 IPR020846 GO:0022857
Vium4632g00003 802 NCBIfam phosphate:H+ symporter 277 783 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vium4632g00003 802 Gene3D MFS general substrate transporter like domains 20 268 IPR036259 -
Vium4632g00003 802 Gene3D MFS general substrate transporter like domains 286 534 IPR036259 -
Vium4632g00003 802 Gene3D MFS general substrate transporter like domains 536 796 IPR036259 -
Vium4632g00003 802 FunFam Inorganic phosphate transporter 1-6 286 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4632g00003 Vium-Chr4632 30448 35334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4632g00003 267 802 Inorganic Solute Cotransporters AT2G38940 79.104 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4632g00003 K08176 - gmx:100792177 996.497