LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium4614g00001	ATGGCTTCGATGCCATTGCTGAATGCTTGGTGGTTATCATTCCCTGGTAGTGCTGGGTGTGCTGGGAGATCTGGTGGTGCTGTGGCATTCTTTGGGAGATCTGGTGGTACTGTGGCATTCTTCGGCGAGAGGAAGAAGACAGAAGTGGGTGAGGGTGATTACACAGATCAATTTTCCACTGATCAAATATTCCCAACACGCGCCAATTTAATTGAATGGGTTCGAAAGATTGCATTTGATCTTGGATTTGTTGTCGTCATTATAAGATCTGACACAGCAACTGGTGAAGCTGGTAGAAAGACATTTATTTTGTTAGGCTGTGAAAGAAGCGGGAAGTATAGGAAGTATAAGCCAGATGTTCAACCTAGTTTCTCTGGCACAAGAAAATGTGAGTGTTCGTTTAGGTTGAGGGGTAAACCTAAAGGAGATGGTTGGGTGTTAAAGCTTATGTGCGGCTATCACAACCATGAATTAGCAGAGACTTTGGTCGGTCATCCTTTCGCGGGTAGGTTAAATGTTGTTGAACAATCAATTCTTGTGGACATGACTAATAGTCTAGTAAAGTCGTCAAATATTCTTTTGACTCTGAAAGAACATAATGAAGATAATGTGACCACGATAAAGCAAATATATAATGCGAGGTACACGTACAAACGATCTTTGAAAGGGTCTAGAACTGAAATGCAGCATTTGATGCTGGGTACAGTGGGTAAGTAA	717	0.4198	MASMPLLNAWWLSFPGSAGCAGRSGGAVAFFGRSGGTVAFFGERKKTEVGEGDYTDQFSTDQIFPTRANLIEWVRKIAFDLGFVVVIIRSDTATGEAGRKTFILLGCERSGKYRKYKPDVQPSFSGTRKCECSFRLRGKPKGDGWVLKLMCGYHNHELAETLVGHPFAGRLNVVEQSILVDMTNSLVKSSNILLTLKEHNEDNVTTIKQIYNARYTYKRSLKGSRTEMQHLMLGTVGK	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium4614g00001	238	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	103	218	IPR010061	GO:0004491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium4614g00001	Vium-Chr4614	26837	29288	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vium4614g00001		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium4614g00001	-		-	var:108339443	351.673