Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4613g00020 ATGGTGGCGATAGGATTGTGCATGATTGTTGTTGAATGTAGGAAACATGTGAGCATAAAGAACAGGCTTGGAGCTGGAAAGAACATGACTTTGCATTGCCAGTCGAAGGACAATGATCTGGGACAACAAAATATAGCAAATGGAGATGAGTTTGGGTGGGATTTCTCAGACAATATTATTGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTGAGGAATACCATTTCAATGCTTATTCCTTCGGCAGGGACAGAGTACGGTGTGATGGTGTCGGCTGTTCATGGCTCCTATCTGCCGAAGGCATTTATGGCTTCAATGTACAAACGGCCTTCTGGGAATTCATGTACCAATGGCCAAATTAA 372 0.4355 MVAIGLCMIVVECRKHVSIKNRLGAGKNMTLHCQSKDNDLGQQNIANGDEFGWDFSDNIIGTTLFFCDVGWEKVEEYHFNAYSFGRDRVRCDGVGCSWLLSAEGIYGFNVQTAFWEFMYQWPN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4613g00020 123 PANTHER - 11 109 IPR010264 -
Vium4613g00020 123 Pfam Plant self-incompatibility protein S1 16 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4613g00020 Vium-Chr4613 173528 173899 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4613g00020 14 121 Carbohydrate Esterase AT3G16970 31.818 1.45e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4613g00020 - - vra:106767420 247.284