Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4613g00019 ATGGGGAAGAACGCGTCATGTTCTTCCGCAGCCATGAGGGCAGAGTCCAACGGAGGATTCCAACATGAAAACCCTCTGGATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTGCTTTTACTAGATTTCTTGCATTTCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCGGCAATTGGGCGAAACGAGAAGTTTTTGAATGCAGTTTTCCCAGAGAAAAGCATCACAGTTCTTGAAACACTGGCCAACATAGGTCTTTTGTTCTTTTTGTTTCTCGTGGGACTTGAGCTTGACATGCGTGCAATTCGACGAACTGGTCGTAAGGCCCTTGGCATTGCCATCTGTGGGATCATTCTACCTTTTATTCTTGGGATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAAGTGTTGAGCTATTTCCTTTTCTAGTCTTCATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCTGAACTTAAACTCCTAACCACCGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCGATAGCCCTTTCTGGTTCTGATGCATCCCCCTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGCTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAGCCAGTGAAGGAGCTCTACATATGCATCACGTTGACTCTGGTTTTGGTTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCCCTCTTTGGGGCTTTTGCGGTTGGTACTATTATGCCAAGAGAAGGTTCCTTCTCTAGGGTGTTGACTGAGAGGATAGAAGACCTGGTATCTGGCCTTTTCATGCCACTATATTTTGTGTCCAGTGGCTTGAAGACTGATGTGGCAACAATAAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAATGCTTGCTTTGGGAAGATCATTGGTACTACTGTTGTTTCCTTATTGTGTGAGGTGCCTTCCACAGAAGCCCTGACTCTTGGATTTCTCATGAACACAAAAGGCTTGGTAGAGCTCATTGTTCTCAACATTGGGAAGGACCGTAAGGTGTTAAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTTACTACCTTCATCTCCACCCCAATGGTGATGGTTGTATATAAACCAGCTCGTAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGAATGCTAGCTTGCTTCCACAACACCCACAACATTCCCTCGCTAATCAATCTAATAGAGTGTTCCCGTGGAACCGGAAGAAAAGGAAAGCTTTATGTATACACAATGCATTTGATGGAGCTCTCGGAGCGATCTTCGGCAATCACAATGTTTCATATGGCACGCAAGAATGGAATGCCCTTTTGGAACAAAAAGCGGAAGGGCAAAGATCAAATGATCATAGCTTTTCAGGATTATGAGAAACTGAGCAGTGTCAGTGTCCGCCCCATGACAGTCATTTCTGGTCTCAATAGCATCCATGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTTGATGGATCGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCTCGGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGGACGAGCCAAGTCCAAGCCAGTGATGTGTCTTATAAGATAGTGGTACCCTTCTTTGGAGGGCGTGATGATCGTGAAGCTCTTTGTTATGGAATGAGAATGGCAGAGCACCAGGGTATTTTTCTAAATGTGTATAAGTTTGTAACTCCACCAGGGACATCATTGGCCTTTGATGCTGAATCGGTTGGGGAGTCATCAAAGAAAGATAGGAAAACAGTGCATGTGATTGACGACAACGATTATGATGATAAGAAACAGGATGATCAATTATGGAATGAGTTTTTAAGTGCATGCAACAACAACACCCAAGAGACAATGAAGTATGAGGAAAAGCTAGTGGAAAGCAAAGGAGATATTGAGATAGCATTGAAGGAAATGAATAGATGCAACCTCATATTGGTTGGTAGAATGCCATCAGTGGCAGCTTTGGGTAGCATAAGTGATTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTACACTCTTACGTCTGTAATGGTAATTCAGCAATACAATCCCTCAACTGACATTCATCCGTTTGTGAGGGAGGAATCTGATTTACCAGATATGTCACATACACCAGCTGGGGGTTAA 2436 0.4454 MGKNASCSSAAMRAESNGGFQHENPLDYALPLLILQICLVVAFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPEKSITVLETLANIGLLFFLFLVGLELDMRAIRRTGRKALGIAICGIILPFILGIGTSIALRATVSKSVELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSDASPFVPLWVLLCGAAFVIFVVFAIRPLLVAMANRSLEGEPVKELYICITLTLVLVCSFVTDTIGIHSLFGAFAVGTIMPREGSFSRVLTERIEDLVSGLFMPLYFVSSGLKTDVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLCEVPSTEALTLGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVVMALFTTFISTPMVMVVYKPARRGAPYKHKTIQRDPDTELRMLACFHNTHNIPSLINLIECSRGTGRKGKLYVYTMHLMELSERSSAITMFHMARKNGMPFWNKKRKGKDQMIIAFQDYEKLSSVSVRPMTVISGLNSIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESLGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVSYKIVVPFFGGRDDREALCYGMRMAEHQGIFLNVYKFVTPPGTSLAFDAESVGESSKKDRKTVHVIDDNDYDDKKQDDQLWNEFLSACNNNTQETMKYEEKLVESKGDIEIALKEMNRCNLILVGRMPSVAALGSISDCPELGPVGSFVASSDFYTLTSVMVIQQYNPSTDIHPFVREESDLPDMSHTPAGG 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4613g00019 811 Gene3D - 32 434 IPR038770 -
Vium4613g00019 811 FunFam Cation/H(+) antiporter 15 32 434 - -
Vium4613g00019 811 PANTHER CATION/H + ANTIPORTER 9 786 - -
Vium4613g00019 811 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4613g00019 Vium-Chr4613 162982 166688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4613g00019 12 806 Antiporter Super Family AT3G17630 66.709 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4613g00019 K26731 - gmx:100780382 1290.79