Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4613g00018 ATGGTGGCGATAGGATTGTGCATGATTGTTGTTGAATGTAGGAAACATGTGAGCATAAAGAACAGGCTTGGAGCTGGAAAGAATATGACTTTGCATTGCCAGTCGAAGGACAATGATCTGGGACAACAAAATATAGCAAATGGAGATGAGTTTGGGTGGGATTTCTCAGACAATATTATTGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTGAGGAATACCATTTCAATGCTTATTCCTTCGGCAGGGACAGAGTACGATGTGATGGTGTCGGCTGTTCATGGCTCCTATCTGCTGAAGGCATTTATGGCTTCAATGTACAAACGGCCTTCTGGGAATTCATGTTCCAATGGCCAAATTAA 372 0.4274 MVAIGLCMIVVECRKHVSIKNRLGAGKNMTLHCQSKDNDLGQQNIANGDEFGWDFSDNIIGTTLFFCDVGWEKVEEYHFNAYSFGRDRVRCDGVGCSWLLSAEGIYGFNVQTAFWEFMFQWPN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4613g00018 123 Pfam Plant self-incompatibility protein S1 16 121 IPR010264 -
Vium4613g00018 123 PANTHER - 11 109 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4613g00018 Vium-Chr4613 160971 161342 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4613g00018 14 121 Carbohydrate Esterase AT3G16970 31.818 9.51e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4613g00018 - - vra:106767420 245.743