Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4608g00001 ATGGTGGTGAAGGTGTATGGCCCAGACTATGGAAGCACTAAGGGAGTGATAGTGTGTCTGATTGAGAAGGAAGTTGAGTTCGAAACTGTGCATGTTGATGGCTTTAAGGGAGAACACAAACAGCCCGAATATCTCAAGTTGCAGCCCTTTGGACTGATGCCTGTTGTTGAAGATGGGGATTATGTTCTTTATGAATCACGGGCAATACTGAGGTATTATGCAGAAAAGTACAAAAATCAAGGGACGAATATGTTGGGAAAGACAATGGAAGAGAGAGGGCTTGTGGAACAATGGCTTGAAGTTGAAGGGCATAACTATACTCCACCGATCTACAACTTGAT 341 0.434 MVVKVYGPDYGSTKGVIVCLIEKEVEFETVHVDGFKGEHKQPEYLKLQPFGLMPVVEDGDYVLYESRAILRYYAEKYKNQGTNMLGKTMEERGLVEQWLEVEGHNYTPPIYNL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4608g00001 113 Pfam Glutathione S-transferase, N-terminal domain 17 74 IPR004045 -
Vium4608g00001 113 CDD GST_N_Phi 2 76 - -
Vium4608g00001 113 Gene3D - 3 113 - -
Vium4608g00001 113 FunFam Glutathione S-transferase F2 2 85 - -
Vium4608g00001 113 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Vium4608g00001 113 SUPERFAMILY Thioredoxin-like 5 81 IPR036249 -
Vium4608g00001 113 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 112 - -
Vium4608g00001 113 SFLD Main (cytGST) 14 112 - -
Vium4608g00001 113 SFLD Glutathione Transferase (cytosolic) 14 112 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4608g00001 Vium-Chr4608 518 1099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4608g00001 1 113 Glutathione S-transferase Gene Family AT2G30860 62.832 7.26e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4608g00001 K00799 - vum:124838524 238.424