Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4593g00002 ATGTCGCAGTTGAACGGAGCCTACTACGGCCCCGCCATTCCGCCGCAGAAGTCCTACAACCGCCCAGGGCGCGGCAGCGGCGCTGGTTGCTGCTGTGGCTGCCTCTTCAGCTGCCTCTTCAGCTGCCTCTTCAGCCTCATCTTCAAGGTGATCCTCACGCTGATCATCATCGTGGCCATCGCCGTGTTCATCTTCTGGCTCATAGTCCGTCCAAACATGGTGAAATTCCACGTCACTGACGCCACCCTCACGGAGTTTAACTATACTGACAACACCCTCCACTACGATCTTGCCCTGAACATCACAGTGCGCAACCCTAACAAGAGGCTGGGCATCTACTACGACTTCATCGAGGCGAACGCATTGTTCCACGACGCCAGGTTCAACACCCAGTACCCCGATCCCTTCTACCAGGGGCACAAGACCACGCACGTGCTCAACCCCGTCTTCAAGGGGGACAAAGTATTGGTTTTGGACGCTGACCAGAGCTCCGAATTGAAGAAGGAGAACTCCACCGGGTTGTATGAGATCGATGTGAAGATGTACCTGAGGGTGAGGTTCAAGCTGGGCGCTTTCAAGACCAAGACACTCAAGCCCAAAGTCAGCTGCGACTTGCGCGTGCCTTTCAAGGGAAGCGCCACCGCCTTTGAAACCATCAAGTGCGACTGGGATCGCTGA 678 0.559 MSQLNGAYYGPAIPPQKSYNRPGRGSGAGCCCGCLFSCLFSCLFSLIFKVILTLIIIVAIAVFIFWLIVRPNMVKFHVTDATLTEFNYTDNTLHYDLALNITVRNPNKRLGIYYDFIEANALFHDARFNTQYPDPFYQGHKTTHVLNPVFKGDKVLVLDADQSSELKKENSTGLYEIDVKMYLRVRFKLGAFKTKTLKPKVSCDLRVPFKGSATAFETIKCDWDR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4593g00002 225 Pfam Late embryogenesis abundant protein 100 203 IPR004864 -
Vium4593g00002 225 PANTHER OS05G0367900 PROTEIN 31 210 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4593g00002 Vium-Chr4593 11503 12576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4593g00002 68 215 SNARE and Associated Proteins AT1G32270 36.424 5.05e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4593g00002 - - gmx:100793187 326.25