Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4587g00001 ATGAGCAAAACTCACCCACATTGTCGACGTGACATCACGTGGATTTTACTCTTTCTGCTTCTTGCTCTTCTTCTTCCGTGCGTGGTTGATGGTGACGGCGACGGCGACGGCGATCGGTGTAAATGCAAAAGCGATAAAGAAGAAGGTGGAGAAAAGGTTGACAAGAATTTGGCCAAGAAGTACAAAATCGGAGCTCTTGTTTCGATTCTGGTTGCAAGTGCAGTTGGCGTCAGCCTTCCAATGCTCAGCAGAATTTTCCCCGCCTTGCATCCGGAGAAGGACTTCTTCTTCATGGTGAAGGCCTTCGCGGCTGGGGTCATATTATCCACCGGTTTCATTCATGTATTGCCAGATGCTTTTGAAAAGCTGACGCCTCCCAGTCTCTGTCATCATCCCTGGGACGATTTTCCCTTCGCCGGATTTGTGGCAATGGTGGCAGCCATCGGAACGCTTATGGTTGATTCTCTTGCGACTGCGTATTTTAAAAAGTCCTCGCTAAGCGCCATGGACCGAGTTGCTGAGGAAGAAGATCTGCATGAACATAATCGCCATGCAACTCATCATTCTCATTCTCATTCTCACGCTTCCATGTCTTCTCCTTCGACGAACCTCCTTCGCCATCGCGTTATTTCTCAGGTGCTGGAGCTGGGGATTGTGGTGCATTCTGTGATAATAGGGATCTCTCTGGGTGCATCTGAAGATCCTAAAACGATAAGACCTCTTATTGCTGCTTTAACTTTTCACCAATTTTTTGAAGGCATGGGGCTCGGTGGTTCCATCTCACAGGTATTGCAATTTTGTTTATTCTTTTGCTCATTGATTTGTAATCGTAAAGTTTTTGGAAACTGA 849 0.4676 MSKTHPHCRRDITWILLFLLLALLLPCVVDGDGDGDGDRCKCKSDKEEGGEKVDKNLAKKYKIGALVSILVASAVGVSLPMLSRIFPALHPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTPPSLCHHPWDDFPFAGFVAMVAAIGTLMVDSLATAYFKKSSLSAMDRVAEEEDLHEHNRHATHHSHSHSHASMSSPSTNLLRHRVISQVLELGIVVHSVIIGISLGASEDPKTIRPLIAALTFHQFFEGMGLGGSISQVLQFCLFFCSLICNRKVFGN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4587g00001 282 NCBIfam ZIP zinc/iron transport family 50 263 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium4587g00001 282 Pfam ZIP Zinc transporter 61 262 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium4587g00001 282 MobiDBLite consensus disorder prediction 177 200 - -
Vium4587g00001 282 PANTHER ZINC/IRON TRANSPORTER 59 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4587g00001 Vium-Chr4587 30016 31403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4587g00001 58 261 Inorganic Solute Cotransporters AT3G12750 57.619 4.92e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4587g00001 K14709 - ini:109149265 266.929