Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4576g00005 ATGTATAGATCATTTCTGAAATGTGATGATCCAAAAGGAGTTGTAGGATGTGGGACAATCAGGAAATACAGAACTCGTTCTCACAAAGGGAAGGACAAGACAAAAATGCAGAAGACAAGTGATATAATGGAAACATCCTTGATCAACAAGAGATACAAGGAGGAGAAGAAGGTCGCCAAAGAATGCGATGGAAATCTCGTTGGTCCATCATCTTTGCAGCTCACAAAGGTCTCCGAAGAGGATCATAGCTTGACCAATATGCTAGATTCATGGTCTAGAGATATTATATGTGAAGGAAAGTCCGAAGATATAGCAAAAGGTATTTTAAAAGGGGCTCTTGGTCTGCAAGATTCTCTGAGCATGCTTCGCAAGTTGCAAGAGGAGGTCGCACAACATACAGCTCCTTTTGGGAGAAAACAGACTGAGAAACCAGAAAGAGACAGAATTGATGGAAACAAGATTGGTATAAGGCAGGCTAATCCATTAGGAGAACAAAGTAATACAAAGGGGTTTCAAAGATCACAGCTTTCTGCTGGTGGTTCTTCAAGTAACTGCAAAGAGGAACTAAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGACGGATTTAATTCAGGTTCAGAAACTTTTCATATAAGCACAAGCCAATGTTTTGGGGTCAAGAATGACAGACTTTCTGATCCTTCTTCATCAGTAATAGCTTCAAGGATTGAAAAAGGACCTAGCCTAGTTTTCAAGCTGATGGGTTTAGAAGAAGGCCCCTCAAAATCATTTCCAGCTGCAAAGCAAAAACTATTGGGTGGTGAGATAGATAAGTCAAAGGTCAGAAACAATGATTCTACGGATGAGAAGGTTAATCCAGAACTAAAAGTCGTGAGGGAAACTCTTGAGACTACGCATTTCAAAGGTATTTTTAAGGAGAATTTTGTCAAAGATTCTAAGCATCATGTGCATCATCATTTCAATGACACCAGTTCCAAGCAGTTTGTTGATTTATCTCACATTTCATCTACGGAACCTCAATGTACAATTTACCAACAATCAGAAAAAAGTGCCTATATTCCAGTTCTTCCAAAGGAGTTGAGAAAACTGAGAAGAGAAATACTCTCTTCCAAAACTATCAAACATAGAAAAGGTTCCAGTTCCACCAACATGGGAAAAGAAATGGAAAAAGGTATTAGGAAACGGCTTAAGAAAGAGGGAGGACCAAAATTTCTCAAAGAGGTTACTAAAGTGGATGCAAAAGGAAACAATCCTGTTGAAGAATATGCGGGTAAGGTAAAACTGTATTGTCACATTGGTCACACATCACATGTAAATGAGACAATTGATAGAAAATGGAAGGTACGGCCGATTAGCAGAAAACAGACAGAAAAGGATATCTCACAACCAACAATTGTGGCAGAACATCAGTACAAACGAGAAATCCCCTCCACAAAATTGAGGAAGCTGAAAAGTGGATCCAGAATCGACAAGAATGAGATTTCTTGCCTAAAGAGTAGAGGTTCAAACAACATCTCCACTAAAAAAACTACGAATTCCAAGGACGTTAAAGTTGAGAATAAAAAAGTTAATTCCGTGGTAGATTCCATAACAGGTAGAAAGAATCAAATGAAAAAACAAAGCCCTGTTGCTGAGCCAGAACTGGCTAATCTAACTGTAAGTTTGCCTTTTATTCTGTGCATATATATTAACCAGATAATGAAGTGA 1731 0.3847 MYRSFLKCDDPKGVVGCGTIRKYRTRSHKGKDKTKMQKTSDIMETSLINKRYKEEKKVAKECDGNLVGPSSLQLTKVSEEDHSLTNMLDSWSRDIICEGKSEDIAKGILKGALGLQDSLSMLRKLQEEVAQHTAPFGRKQTEKPERDRIDGNKIGIRQANPLGEQSNTKGFQRSQLSAGGSSSNCKEELKKVIKESLVRQNMFPKTSDGFNSGSETFHISTSQCFGVKNDRLSDPSSSVIASRIEKGPSLVFKLMGLEEGPSKSFPAAKQKLLGGEIDKSKVRNNDSTDEKVNPELKVVRETLETTHFKGIFKENFVKDSKHHVHHHFNDTSSKQFVDLSHISSTEPQCTIYQQSEKSAYIPVLPKELRKLRREILSSKTIKHRKGSSSTNMGKEMEKGIRKRLKKEGGPKFLKEVTKVDAKGNNPVEEYAGKVKLYCHIGHTSHVNETIDRKWKVRPISRKQTEKDISQPTIVAEHQYKREIPSTKLRKLKSGSRIDKNEISCLKSRGSNNISTKKTTNSKDVKVENKKVNSVVDSITGRKNQMKKQSPVAEPELANLTVSLPFILCIYINQIMK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4576g00005 576 PANTHER OS01G0228800 PROTEIN-RELATED 1 536 - -
Vium4576g00005 576 MobiDBLite consensus disorder prediction 159 183 - -
Vium4576g00005 576 MobiDBLite consensus disorder prediction 154 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4576g00005 Vium-Chr4576 20541 23578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4576g00005 1 207 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.649 2.47e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4576g00005 - - vum:124838393 1134.4