Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4561g00003 ATGGCTTCTTGCATGTGGCTCAAGAGTGCCTGTGGTGGTGGCAGTGGGAAGAAGCCGACGCCGCGGGACGTGCCGCCGGGGCACTTGGCGGTGATGGTGGGAGAAGAGGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCCTTGCTTCAAAAACTTTTAGACAATTATGAAGGTTGTGGCTTCAACAAAAGTGGCCCTCTTGCTATACCTTGTGATGAGTACCTTTTCCAAGATATTATCCAGGCCCTTCGAGATGGATCATCCTCTCCTCACGGGCCCCTCAAGAAGCTCCATTTCAAGGACTCTGTGCCCTTACTTCAGGACAATGATGGCAAAGGGAGCACCAACAACAACTAA 369 0.5068 MASCMWLKSACGGGSGKKPTPRDVPPGHLAVMVGEEAKRRFVIRADYLNHPLLQKLLDNYEGCGFNKSGPLAIPCDEYLFQDIIQALRDGSSSPHGPLKKLHFKDSVPLLQDNDGKGSTNNN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4561g00003 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 83 IPR003676 GO:0009733
Vium4561g00003 122 Pfam Auxin responsive protein 18 87 IPR003676 GO:0009733
Vium4561g00003 122 MobiDBLite consensus disorder prediction 91 122 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4561g00003 6 96 Calmodulin-binding Proteins AT4G34750 53.763 8.24e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4561g00003 K14488 - gmx:100777611 167.548