Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4558g00005 ATGGCGAAGGAGCAGGTTCAGGTGCTAAATGCCCTGGACACGGCAAAAACGCAATGGTATCATTTCACAGCAATCATCGTTTCAGGAATGGGCTTCTTCACCGATGCCTACGATCTGTTCTGTATATCACTTGTCACAAAGCTCCTTGGTCGCATTTACTACCACGTTGATGGGGCTGCAGACCCTGGATCACTGCCTCCAAATGTGTCAGCTGCTGTTAACGGTGTAGCTTTTGTTGGAACACTTTCTGGGCAGCTCTTCTTCGGATGGCTCGGTGACAAAATGGGTCGAAAAAAGGTTTATGGCATGACACTCATGCTTATGGTATTAGCCTCTATTGCTTCAGGTCTTTCCTTCGGAAGTGATGCAAAGACTGTGATGACAACTCTTTGCTTCTTCCGCTTCTGGCTTGGTTTTGGCATTGGTGGAGACTACCCTCTTTCAGCCACCATAATGTCTGAGTATTCTAACAAGAAGACTCGTGGTGCCTTCATTGCTGCCGTGTTTGCCATGCAGGGTTTTGGAATATTGGCAGGAGGTGTGTTTGGAATCATAGTATCATCTGTATTCATGGCCAAGTATGATGTTCCATCATACGAGGTTGATCCCTTGGGTTCAACTGTTCCACAAGCAGACTATCTTTGGAGGATAATTCTGATGGTGGGAGCACTTCCTGCTGCCTTGACTTATTATTGGAGACTAAAGATGCCAGAAACTGCACGCTACACTGCATTGGTTGCCAAGAATATGGAGAAGGCTGCAGCAGATATGTCTAAGGTTATGCAGTTGGAGATTCAAGCTGAGCCAAAGAAGGAAGATGAACAAAATTCATATGGATTGTTCTCCAAGGAATTCATGAATCGCCATGGACTTCATCTGCTTGGAACCACAAGCACATGGTTCTTTCTTGACATTGCATTCTACAGCCAAAATCTGTTCCAAAAGGATATATTCAGCGCAATTGGTTGGATTCCTCCAGCAAAGACCATGAATGCGCTTGAGGAGGTTTTCAGAATTGCAAGGGCTCAAACTCTCATTGCTCTCTGCAGTACAGTTCCGGGATATTGGTTCACTGTGGCCTTCATTGATACCATAGGAAGATTTACCATTCAGTTGATGGGGTTCTTCTTTATGATTGTCTTCATGTTTGCTCTTGCAATTCCCTATGACCACTGGACCCTTAAGGAGAACCGAATTGGATTTGTGGTCATTTACTCTCTCACCTTTTTCTTTGCAAACTTTGGGCCCAATGCAACCACATTTGTTGTGCCAGCAGAGATTTTCCCAGCTAGGTTTAGATCCACTTGCCATGGAATATCTTCAGCATCTGGGAAGCTTGGAGCCATAGTTGGTTCATTCGGGTTTTTGTACTTGGCACAGAATAAGGATCCAAGTAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAAAACTCATTGATGGTGTTAGGAATGGTTAACGTATTAGGCTTCGTTTTTACCTTCCTCGTGCCTGAGTCAAAGGGTAGATCTTTGGAAGAGATTTCGGGAGAGCAAGAAGAGGAAGTTCAAGAAACCAAAGCATAA 1569 0.4461 MAKEQVQVLNALDTAKTQWYHFTAIIVSGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAADPGSLPPNVSAAVNGVAFVGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVLASIASGLSFGSDAKTVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFGIIVSSVFMAKYDVPSYEVDPLGSTVPQADYLWRIILMVGALPAALTYYWRLKMPETARYTALVAKNMEKAAADMSKVMQLEIQAEPKKEDEQNSYGLFSKEFMNRHGLHLLGTTSTWFFLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFTIQLMGFFFMIVFMFALAIPYDHWTLKENRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGSFGFLYLAQNKDPSKTDAGYPAGIGVKNSLMVLGMVNVLGFVFTFLVPESKGRSLEEISGEQEEEVQETKA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4558g00005 522 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium4558g00005 522 Gene3D MFS general substrate transporter like domains 20 522 IPR036259 -
Vium4558g00005 522 NCBIfam phosphate:H+ symporter 9 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vium4558g00005 522 SUPERFAMILY MFS general substrate transporter 11 510 IPR036259 -
Vium4558g00005 522 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 507 - -
Vium4558g00005 522 FunFam Inorganic phosphate transporter 1-6 20 522 - -
Vium4558g00005 522 CDD MFS_PhT 25 502 - -
Vium4558g00005 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4558g00005 Vium-Chr4558 50478 58823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4558g00005 1 516 Inorganic Solute Cotransporters AT3G54700 83.366 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4558g00005 K08176 - gmx:100786638 936.406