Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4549g00006 ATGAAGGGCAGTGGCTGCAGTGAAGCATCATCTGGTGGAGGAAACATGAATGTGAAACCTGCATGGCTAGAGAAGCTTATGGCTGAGACATTCTTTGGCAATTGTGGGGTCCACCAGAATCAAAAGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTACCTTAGCATCTGCCCCCACTGTCTCCCTTCTCACCGTTCCCATTCCCTTCTCCAGGTGAGAAGGTATGTGTACCATGACGTGGTTCGATTGGGTGACCTAGAAAAGCTCGTCGATTGCGCCAATATTCAGCCATACACCATTAACGGTGCCAAAGTGATATTCTTAAATCAGAGGCCACAGTCAAGGTCATTTAAAGGCACTGCCAACACTTGCTGCACTTGTGACAGGATTCTTCAGGAGCCCTTTCACTTCTGTTCTCTGTCATGCAAGTTTGAGGGTCTAAGTGTTGATTGCTATACCCAATTTGTCCCCACTTCCTCTGAGGCTACCACTAGCATGGCCAACAACAACAACAACAAGCAGAACACAAATGGCTTCTTCATCTCTCTTGGAAGCAGAAGAAAGGGGGCTCCCCATAGAGCTCCTCTTTCCTAG 597 0.4757 MKGSGCSEASSGGGNMNVKPAWLEKLMAETFFGNCGVHQNQKKNEKNVFCLHCYLSICPHCLPSHRSHSLLQVRRYVYHDVVRLGDLEKLVDCANIQPYTINGAKVIFLNQRPQSRSFKGTANTCCTCDRILQEPFHFCSLSCKFEGLSVDCYTQFVPTSSEATTSMANNNNNKQNTNGFFISLGSRRKGAPHRAPLS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4549g00006 198 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 17 197 - -
Vium4549g00006 198 Pfam PLATZ transcription factor 74 144 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4549g00006 Vium-Chr4549 95815 99797 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vium4549g00006 PLATZ 5.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4549g00006 - - gmx:102668349 337.806