Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4544g00007 ATGGAGATGGGAGAACTTCCCGACATTGTTTTATCTGAGCTGCCCGGTTCCTGCGTCATTGGCCATGTCCGCTACTCCACCGCTGGCCACTCCAAGCTCGTGAACGTCCAACCCTTCGTCGCCGGCTACCGTTTCGGCTCTGTCCCCGTCGCGCACAATGGAAACTTCGTGAACTACCGCTCCCTACGCGCCAAACTGGAAGACAACGGGTCCATCTTCAACACGACCTTCGACACCGAGGTCGTGCTCCACCTGATTGCCACCTCCAAGCACAGACCTTTCCTACTCAGAGTCGTGGATGCCTGCGAGAATCTGAAGGGGGCGTACTCCCTGGTGTTCCTCACGGAGGACAAGCTGGTGGCTGTGAGGGACCCCTTCGGGTTCCGACCTTTGGTGATGGGAAGGAGAAAGAACGGTGTTGTGGTTTTCGCCTCGGAGACATGCGCGCTGGATTTAATCGATGCGACGTATGAGAGAGAGGTGAACCCGGGTGAGGTTGTGGTGGTGGACCACACGGAAATCCAATCCCTCTGCCTCGTGACTCATCAAGAGCCAAAGCAATGCCTCTTCGAGCACATATACTTCGCAGGTCCCAACTCTGTTGTCTTCGGGAGGTTTGTGTACGAGTCTAGGAGGAAATTCGGGGAAATACTGGCCATTGAGAGCCCCGTTGAGTGCGACGTTGTGATTGCGGTTCCCGATTCTGGGGTGGTGGCTGCGCTTGGCTACGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGGGTTTGA 768 0.5651 MEMGELPDIVLSELPGSCVIGHVRYSTAGHSKLVNVQPFVAGYRFGSVPVAHNGNFVNYRSLRAKLEDNGSIFNTTFDTEVVLHLIATSKHRPFLLRVVDACENLKGAYSLVFLTEDKLVAVRDPFGFRPLVMGRRKNGVVVFASETCALDLIDATYEREVNPGEVVVVDHTEIQSLCLVTHQEPKQCLFEHIYFAGPNSVVFGRFVYESRRKFGEILAIESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4544g00007 255 Pfam Glutamine amidotransferase domain 36 150 IPR017932 -
Vium4544g00007 255 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 7 204 IPR029055 -
Vium4544g00007 255 Gene3D - 212 255 IPR029057 -
Vium4544g00007 255 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 11 211 IPR029055 -
Vium4544g00007 255 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 172 IPR017932 -
Vium4544g00007 255 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 11 254 - -
Vium4544g00007 255 SUPERFAMILY PRTase-like 188 254 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4544g00007 Vium-Chr4544 35464 38886 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4544g00007 11 255 PRT Gene Family AT2G16570 78.367 2.32e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4544g00007 K00764 - var:108330186 429.483