Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4510g00004 ATGTCCATGGCTGGTAGTACTGAGCAAGGTGACAGATGCTCCTCCATCATCACCATACCCCTTTTGGAAGATGAAAGAGTGCACCGATTGAACGGCTCAGATGAGGTGTTGGATGCCAAAACTTGGGATCTGCACACATCTCATGAGGGTAACACCTCCTTTTTCAAGACCTGCTTCAATCTCATTAATGCCCTCTCAGGGGTTGGTATTATCTCGATGCCTTATGCTCTGGCATCTGGTGGATGGTTAAGCATATCACTACTATTTGTGATAGCCATTGCTTGTTGTTACACTGGGATGTTGGTGAAAAGATGCATGGACATGGACCCTGATATCAGAACCTTCCCTGACATAGGTCAACGTGCATTTGGATACAAGGGGAGGCTAATGGTATCGATCGCCATGAATTCTGAGCTCTATCTGGTTGTAACAGGCTTTCTGATATTAGAGGGTGACAATCTTAACAAATTAGTACCAAATATCCAAGTTAACCTTGCAGGGGTTACAATTGGTGGTGCAACAATTTTTACCATAGTTGCTGCCCTTGTTATTCTTCCCAGTCTTCTGTTAGAGGATTTGAGCATGCTGTCTTATGTGTCTGCAAGTGGGGCTTTGGCTTCTTCCATCTTCCTCCTCTCTCTGTTTTGGAATGGTACCATTGATGGCACTGGATTTCATGCAAAGGGAAAACTCTTCAGATTCACCGGAATACCTGCTGCTGCCAGTTTATATGCCTTCTGTTATAGTGCACATCCTATTCTTCCCACTCTCTACAATTCCATGAGAGACAAAACTCAGTTCTCCAAGGTTCTGTCTACGTGCTTTTCGGTATGCACTCTTGGTTATGCAGCAGCAGGTGTTTTGGGGTACCTAATGTTTGGAGAAGAGGTTGAATCACAGGTGACATTGAACCTACCAACAAGCAAGTTCAGTTCACATGTGGCAATATTCACGACCTTGGTGAATCCTATAACGAAGTATGCATTGATGCTTACCCCAGTAATAAATGCTGTGAAAAACAAGATTTCATGGCACTGCAACAAAAGATTCACACACACATTTGTTAGCACCTCCATTCTCGTAAGCTCTCTAATTGTAGCTGTGGCCATACCAATGTTTGGATATCTGATGTCACTGATTGGGGCATTGCTAAGTGTGTCAGCTTCAATTTTAGTACCATCAGTGTGCTACTTGAAGATTTCAGGAGCATACAAGACGTTTGGCTCTGAAATGATCATCAACTATTCGATAATAGTATTGGGGGTTACTATTGCTGTTGTCGGTACTTATACATCTCTTGTAGATATAGTTCATAACTTGTAA 1323 0.4278 MSMAGSTEQGDRCSSIITIPLLEDERVHRLNGSDEVLDAKTWDLHTSHEGNTSFFKTCFNLINALSGVGIISMPYALASGGWLSISLLFVIAIACCYTGMLVKRCMDMDPDIRTFPDIGQRAFGYKGRLMVSIAMNSELYLVVTGFLILEGDNLNKLVPNIQVNLAGVTIGGATIFTIVAALVILPSLLLEDLSMLSYVSASGALASSIFLLSLFWNGTIDGTGFHAKGKLFRFTGIPAAASLYAFCYSAHPILPTLYNSMRDKTQFSKVLSTCFSVCTLGYAAAGVLGYLMFGEEVESQVTLNLPTSKFSSHVAIFTTLVNPITKYALMLTPVINAVKNKISWHCNKRFTHTFVSTSILVSSLIVAVAIPMFGYLMSLIGALLSVSASILVPSVCYLKISGAYKTFGSEMIINYSIIVLGVTIAVVGTYTSLVDIVHNL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4510g00004 440 Pfam Transmembrane amino acid transporter protein 51 432 IPR013057 -
Vium4510g00004 440 PANTHER AMINO ACID TRANSPORTER 45 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4510g00004 Vium-Chr4510 61574 66101 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4510g00004 37 437 Amino Acid or Auxin Permease AAAP Family AT3G28960 52.985 2.62e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4510g00004 K15015 - gmx:100784690 735.332