Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium448g00013 ATGGTTTCTCTGCCAACACTCCTCCTATTGTTCGCCGCCTCCGCCGCGATCTTCCTCCATCGCGCGTTGAGCCGGCGGAAGCTTCGGCTGCCGCCTGGGAGCTACGGCCTGCCGTTCATCGGCGAGACGCTGCAGCTGATATCTGCGTACAAGAGTGCCAATCCGGAGCCGTTCATGGACGAGCGCGTGAGGCGCTACGGGTCGATCTTCATGACGCACGTATTCGGCGAGGCGACGGTGTTCTCGGCGGACCCGGAGCTGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTGGATTGCAGTTACCCCGGTTCCATATCGAACCTGCTCGGAAAACACTCTCTTCTCTTGATGAAAGGCGCTCTGCACAAGAGAATGCACTCGCTCACCATGAGCTTCGCCAACTCCTCCATCCTCAAGGATCACCTTCTCCACGACATCGACCGCCTCATCGGCCTCAACCTCGATACCTGGTCCGATCGTGTTACTCTCATGGACCAGGCAAAAAAGATAACGTTTGAGCTAACAGTGAAGCAATTGATGAGCTTTGACCCTGATCAATGGACTGAAAGTTTAAGGAAAGAGTATGTTCTTGTCATTGAAGGCTTCTTCACTCTCCCTTTACCTCTCTTCTCCACCACATACCGGAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCTCTGACGTTGGTAGTGAGGCAGAGGCGAGAAGAGTATAACGAAGGGAAAGGGAAAAAGAGTGACATGCTAGGGGCACTGTTGGCCTCCGGTGACCACTTTTCCGACGAGCAAATAGTGGATTTCCTTTTGGCTTTGCTCGTCGCCGGTTACGAGACCACCTCTACCATAATGACTCTTGCAGTCAAGTTCCTCACTGAGACTCCTCTGGCTTTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAGGAGTGACCCCGGGGCTCCACTGGAATGGACAGATTACAAGTCAATGGTTTTTACCCAACATGTTGTGAATGAGACCTTGAGGGTGGCAAACATAATTGGTGGGATATTTAGAAGAGCAACTACAGACATCAACATAAAAGGTTATACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAATATTACAAAGATGCACGAACCTTCAACCCCTGGAGATGGCAGAGTAACTCATCGGAAGCAGCAAACCCTGCAAATGTTTATACACCTTTTGGTGGAGGGCCACGGTTGTGCCCTGGTTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGCTTTGTCACCCGCTTCAGTTGGGTTCCTGCTGAGGAAGATAAGTTGGTGTTTTTCCCAACAACTAGGACGCAGAAGAGGTACCCTATTATTGTCACGCGTAGAAGTGCAAACCATGTATAG 1422 0.5084 MVSLPTLLLLFAASAAIFLHRALSRRKLRLPPGSYGLPFIGETLQLISAYKSANPEPFMDERVRRYGSIFMTHVFGEATVFSADPELNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSILKDHLLHDIDRLIGLNLDTWSDRVTLMDQAKKITFELTVKQLMSFDPDQWTESLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLVVRQRREEYNEGKGKKSDMLGALLASGDHFSDEQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRARSDPGAPLEWTDYKSMVFTQHVVNETLRVANIIGGIFRRATTDINIKGYTIPKGWKVFASFRAVHLNPEYYKDARTFNPWRWQSNSSEAANPANVYTPFGGGPRLCPGYELARVVLSVFLHRFVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVTRRSANHV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium448g00013 473 PANTHER CYTOCHROME P450 26 26 442 - -
Vium448g00013 473 CDD CYP90-like 62 467 - -
Vium448g00013 473 FunFam Cytochrome P450 90A1 20 468 - -
Vium448g00013 473 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 Gene3D Cytochrome P450 20 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 Pfam Cytochrome P450 31 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium448g00013 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Vium448g00013 473 SUPERFAMILY Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium448g00013 Vium-Chr448 90662 96237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium448g00013 119 468 Cytochrome P450 AT5G05690 80.000 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium448g00013 K09588 - gmx:100795125 828.55