Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium448g00008 ATGATTGATCCAGGAACGGGAGATCAATACTTAAAACGACGCGTTACTACAGGATGTTACGATGTAGATGTCTCAAATGCCAACGACATATGGAAAAGTGAAACCGTCCTGTTCTTTTACCTTCCTACCTTGGCAGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTATTTTGTACTACATCCTCAAACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGATGGGTATTCTGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTCACCCCTTTGAAGTCAATCCTAACAACTGAAACAATATCATACGTGGGACTCATTTACACTGTCTTCCTGGCTGGTTTGGACATGAATTTTGACACAATCCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGCGTTTTGATTCCAATGTTGTGTGGGGGTATCATATATGCTTTGGCTCTAAAAATGTACAAGGGACCTCCAGAGTATTGGGCAAATTACGACACGCCAAAGGCTTATATGTTTTGGACCTTAATTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATTCTTGCAGATCTCAAGCTCCTCTACACGGGACTTGGCAGAGTGACCTTAACAACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCAATGTTGGTTCCATTTGCCATAAACGGTGGAAGTGCCATCTACGGCGTGCTGAGCACTATAGTTTATGTGCTTTTCTGCTTCGCTGTTATTCGTCCTTATTTGGTGGAGATAATAGTGCGCAAAACCAATCAGAATGAGTGGGACAATAGTGGGTTGTTCATTGTGGTCATGGGAGCGTATGCTTCTGCAGCGGTCACGGATCTGCTAGGGACACACCCTGTTGTTGGGGCTCTGGTTTATGGAATCATGATACCTCGTGGTAAATTTACCCACTTGCTCATAGAGAAGTCAGAGGATTTTGGAGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGCTGTGGCATAAGGCTCAGAGCAATATATGTCATAAAAACTCAGGGTTTGGGTTTGGTGCTGTTCATTTTGCTCCTCTCAATCCTTCCGAAGATTTTAAGCACTGTAATAGCCACTCAGTTTTATGGTATGCCTGTTCTTGATGGTGTGTCTATTGGACTGCTAATGAACACCAAAGGCATCCTACCAATCTTAATGCTCAACAGTGCCTGGGACAAACAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTCTAGTAATGACCATGATGGTGCCTCTTATCATCAATGCTATATACAAGCCAAGAAAGCTATACAAACAAAATAAACTTAAGACCCTACAAAACTTAAAGGCCGAAGCAGAGTTGCGTATATTAGCATGTGTCCACAACCCTCGGCAAGCCACAGGAATGATCAACATCCTCGAAGCATGCCACACCACAAAACTCCCCCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAACTGGACACACCGCTTCCCTTTTTGTTTCCCATGTCAATCAGCTCAACCAACAGCAAAGTGGTGGTGAACAAGCCCTCACCAAAGCACAGCAAGACTTGGAGAGCATCACAAACATTTTTCAAACATACGCAGCAATAAATGAGAACAGTAAAGTGGATACCATTGCAGCTGCATCCTCCTATTCAACCATTCACGAGGACATATACAACTTGTCACAGGAGAAACAAGCCAATCTGATTCTCCTTCCTTACCACAAACAATCAAACATAGAAGGCATTCTAGAGACATCCAACACTGCATTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCATGCACTGTGGGAATCTTTGTTGACCGTGGACTTGCCTCATTGTTCAAAGTGAACTTGCGAGTGGTTATGGTTTATATCGGTGGTCCTGATGACCGTGAAGCCTTGGCTGTTGCATGGAGGCTGTCAAAGCATCAAGGGGTACAACTATCTGTGGTGAGGATCCTTATGTTTGGTGAAGCTGCTGAGATTGATGTTATGTCACATGTTGAGAATCATGGACTATTATCTGTGGTAGTAGACAGTGAGAAGCAAAAGGAGTTGGATGATGAGTATGTGAGTGCATTCAGACTGAAAGCAGTGAGCAATGAGGATTCTATAAAGTATTCAGAAAAAGAAGTTCGAAGTCGTGATGATATTCCTGAGGTGCTCCATGAGGTTGACGAAATTGGTTATGATTTGTATATTTTAGGACAAGGGGGAGGTAGGAACTGTTTGATATTAACGGAGTTGATGAAATGGACAGATTGTCCGGAACTTGGTGTCATAGGGGACATTGTGGCATCCAATAACTTTGGTTCAAGCTCTTCACTGCTTATTATACAGCAATATGGGTGTGGGGGAATGGTGTTTGAGAACAGTAATACCACACAGAAGCCTAATGAAGTAGTACCGTCAAACATTGAAGAAGGGCCAGTTTTTGTGAAGGTAGAATGGCATCAGTAA 2508 0.4282 MIDPGTGDQYLKRRVTTGCYDVDVSNANDIWKSETVLFFYLPTLAAQVAFMLLSTRILYYILKPLNQPRLVSEILMGILISPELFGSSALSEVLTPLKSILTTETISYVGLIYTVFLAGLDMNFDTILRGRKKATSIAIAGVLIPMLCGGIIYALALKMYKGPPEYWANYDTPKAYMFWTLILSVTGFPMVSHILADLKLLYTGLGRVTLTTAMISDFYNWVMFAMLVPFAINGGSAIYGVLSTIVYVLFCFAVIRPYLVEIIVRKTNQNEWDNSGLFIVVMGAYASAAVTDLLGTHPVVGALVYGIMIPRGKFTHLLIEKSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLFILLLSILPKILSTVIATQFYGMPVLDGVSIGLLMNTKGILPILMLNSAWDKQILSVESFSILTIAVLVMTMMVPLIINAIYKPRKLYKQNKLKTLQNLKAEAELRILACVHNPRQATGMINILEACHTTKLPPLRVFALQLVELTGHTASLFVSHVNQLNQQQSGGEQALTKAQQDLESITNIFQTYAAINENSKVDTIAAASSYSTIHEDIYNLSQEKQANLILLPYHKQSNIEGILETSNTAFQEINRNVMRDAPCTVGIFVDRGLASLFKVNLRVVMVYIGGPDDREALAVAWRLSKHQGVQLSVVRILMFGEAAEIDVMSHVENHGLLSVVVDSEKQKELDDEYVSAFRLKAVSNEDSIKYSEKEVRSRDDIPEVLHEVDEIGYDLYILGQGGGRNCLILTELMKWTDCPELGVIGDIVASNNFGSSSSLLIIQQYGCGGMVFENSNTTQKPNEVVPSNIEEGPVFVKVEWHQ 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium448g00008 835 Gene3D - 43 448 IPR038770 -
Vium448g00008 835 PANTHER CATION/H + ANTIPORTER 22 798 - -
Vium448g00008 835 Gene3D - 492 772 - -
Vium448g00008 835 Pfam Sodium/hydrogen exchanger family 51 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium448g00008 Vium-Chr448 39158 42435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium448g00008 19 798 Antiporter Super Family AT2G13620 36.111 8.31e-175 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium448g00008 - - vun:114191181 1496.49