Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4465g00009 ATGGTCATGGAGGGAAGAGCCAGTGAGGATTTAACGCCCAGGTATTATGCCCTTTGTGCCATTGGAGGAATGCTCAGTGCTGGCACCACCCACCTTGCCATCACTCCTCTTGATGTATTGAAAGTGAACATGCAGGTGCACCCAATTAAGTATTACAGTATTTCGTCTTGCTTTAATACCTTATTGAGGGAACAAGGGCCTGCAGTCCTTTGGAAAGGTTGGACCGGCAAGTTCTTTGGCTATGGGGCTCAAGGAGGGTGCAGATTTGGTCTCTATGAGTATTTTAAAGGGGTTTATTCAAACGTATTGGTAGACCAGAACAAGAATTTTGTTTTCTTTCTCAGTAGCGCGTCCGCTGAAGTGTTTGCCAATGTAGCTCTATGTCCATTTGAAGCTGTTAAAGTGAGGGTTCAAGCACAACCATGTTTTGCTAAGGGCTTGTTTGATGGCTTTCCAAAGTTATATGCGTCAGAAGGCACACGAGGATTCTACCGTGGACTAATTCCACTTTTGGGTCGAAACATTCCATTTTCCATGGTTATGTTCTCAACATTCGAGCATTCTGTTGATTTTTTGTATCGAAATATGGTTAAAAGAAAAAAGGAGGACTGTTCAATAGGTCAACAACTTGGTGTGACATGTTTAGCTGGGTACGCAGCTGGGTCTGTTGGTAGCTTCATTTCTAATCCTGCTGACAATATTGTATCTTCTCTTTATAACAGAAAGGCTGATAGTCTTGCACTGGCCATCAGAAATATTGGGCTAGGCAATCTATTCACCAGGAGTCTTCCCATTAGGATGTTGCTGGTTGGTCCTTCTATAACTTTGCAATGGTTTTTCTACGACACCATCAAAATTTTAGGCCAACTAGTGGTGAAGTTACAACTGATACGAAAGGAGGTGGGAGAGCCTAAGATTAAGAAAAAAACAGAAATTTGCAGTCACATTTTCAGGCTGACTTGGATGATTGCAAGTCATTTTATACTATGTATAGGATTATTTTTGCGGTAG 1011 0.4194 MVMEGRASEDLTPRYYALCAIGGMLSAGTTHLAITPLDVLKVNMQVHPIKYYSISSCFNTLLREQGPAVLWKGWTGKFFGYGAQGGCRFGLYEYFKGVYSNVLVDQNKNFVFFLSSASAEVFANVALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTRGFYRGLIPLLGRNIPFSMVMFSTFEHSVDFLYRNMVKRKKEDCSIGQQLGVTCLAGYAAGSVGSFISNPADNIVSSLYNRKADSLALAIRNIGLGNLFTRSLPIRMLLVGPSITLQWFFYDTIKILGQLVVKLQLIRKEVGEPKIKKKTEICSHIFRLTWMIASHFILCIGLFLR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4465g00009 336 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 17 288 - -
Vium4465g00009 336 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 291 IPR044677 GO:0005315|GO:1990547
Vium4465g00009 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 287 IPR018108 -
Vium4465g00009 336 Pfam Mitochondrial carrier protein 19 100 IPR018108 -
Vium4465g00009 336 Pfam Mitochondrial carrier protein 110 195 IPR018108 -
Vium4465g00009 336 SUPERFAMILY Mitochondrial carrier 15 283 IPR023395 -
Vium4465g00009 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 14 98 IPR018108 -
Vium4465g00009 336 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 191 IPR018108 -
Vium4465g00009 336 Gene3D Mitochondrial carrier domain 17 290 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4465g00009 Vium-Chr4465 59532 64044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4465g00009 3 287 Chloroplast and Mitochondria Gene Families AT2G17270 66.434 6.63e-147 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4465g00009 K15102 - gmx:100788974 560.836