Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium445g00002 ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTACGAACCCTTGCCATCTCCTTTCCCTCCACGTACTGTTGGGATGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCCCTCACTGTGATTCCTGAGGAGGACAGAAGTGTCGGTGGATTGGATTAA 264 0.4773 MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESLTVIPEEDRSVGGLD 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium445g00002 87 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 71 IPR043561 GO:0003700|GO:0006355
Vium445g00002 87 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 42 IPR025610 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium445g00002 1 55 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 60.000 2.15e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium445g00002 - - vum:124840535 192.971