Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4434g00001 ATGAGCAAAATGGCAGAGAAAGACAAGGTGATCCTACACGGGATGTGGGCCAGTCCATATGCCAGAGGGTAGAATTGGCCCTTATTCAAGGGCATACCCTACGAGTATGTGGAAGAAGACTTGAGAAATAAGAGTGAATTGCTTCTTAAGTACAACCCGGTTCACAAGAAGGTTCCTGTACTTGTTCATAATGGAAAGGCCATTGCTGAGTCCATGGTGATCCTTGAATACATCGATGAAACATGGAAACATGGTCCCAACCTGCTTCCCACTGATTCCTACAGAAGGGCCCAAGCTCGCTTCTGGTCCAGTTTCATTCAGGATCAGTTGATGGAGACGACTATTCTAGTATTGAAAACTGACGGAGAAGCGCAACAGAAGGCAGTTGACCAAGTGTATGAAAAACTAAATGTACTTGAAAATGGAATGAAGACCTATCTGGCAGAACGCGATGCAAAGGTGGAAAGCAACTTTGGAATCGTGGAAATTGTGTTTTGTGCGTTGTTTGGTTGTCACAAGGCTCATGAAGAAGTTCTTGGCATGAAGTTCATAGTGCCTGAAAAGTTTCCAGTGTTATTTTCTTGGTTGATGGCCATTGCATATGTGGAAGCAGTGAAAAAGGCAACTCCTCCACATGAAAAAACAGTGGGAATTCTTCATCTTTTCAGGCAGTCTGCTTTGAAATCTTCTGCTCCAGCCTGA 702 0.4387 MSKMAEKDKVILHGMWASPYARGXNWPLXFKGIPYEYVEEDLRNKSELLLKYNPVHKKVPVLVHNGKAIAESMVILEYIDETWKHGPNLLPTDSYRRAQARFWSSFIQDQLMETTILVLKTDGEAQQKAVDQVYEKLNVLENGMKTYLAERDAKVESNFGIVEIVFCALFGCHKAHEEVLGMKFIVPEKFPVLFSWLMAIAYVEAVKKATPPHEKTVGILHLFRQSALKSSAPA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4434g00001 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Vium4434g00001 234 Pfam Glutathione S-transferase, N-terminal domain 10 81 IPR004045 -
Vium4434g00001 234 SFLD Main.3: Omega- and Tau-like 6 230 IPR045073 -
Vium4434g00001 234 Gene3D - 90 231 - -
Vium4434g00001 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 215 IPR045073 -
Vium4434g00001 234 SUPERFAMILY GST C-terminal domain-like 81 225 IPR036282 -
Vium4434g00001 234 CDD GST_N_Tau 10 83 - -
Vium4434g00001 234 Gene3D Glutaredoxin 3 89 - -
Vium4434g00001 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 228 IPR010987 -
Vium4434g00001 234 SUPERFAMILY Thioredoxin-like 9 110 IPR036249 -
Vium4434g00001 234 FunFam Tau class glutathione S-transferase 4 91 - -
Vium4434g00001 234 SFLD Main (cytGST) 6 230 - -
Vium4434g00001 234 CDD GST_C_Tau 95 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4434g00001 Vium-Chr4434 5446 7242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4434g00001 6 234 Glutathione S-transferase Gene Family AT1G74590 43.668 1.55e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4434g00001 K00799 - gmx:547581 381.333