Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium440g00009 ATGGCGTCGACCGGAAACATGAAGGGTTTTTACCGACAGAGGAAAACCACCGCTACGAAGAAATCTTCCAAAAAATCTCCGATCCCCACCGTGATCCAAACGCCGGCTACCTCCTCCGGCGCTGAATGCAATGAGAGTGAGGTGGTGTTGCGGCAATTCGATTTGAACATGGCTTATGGGCCCTGCCTCGGGATAGCGCGGCTTGCACGGTGGGAGCGTGCTCAGAGACTCGGTTTGAACCCTCCCCAGGAAATCGAGAGTCTCCTGAAGAGTGGGAAAGTTCAGATGGAGTCATTGTGGGGTGGTCGCATTTAG 315 0.5429 MASTGNMKGFYRQRKTTATKKSSKKSPIPTVIQTPATSSGAECNESEVVLRQFDLNMAYGPCLGIARLARWERAQRLGLNPPQEIESLLKSGKVQMESLWGGRI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium440g00009 104 Pfam DNA polymerase delta, subunit 4 39 91 IPR007218 GO:0000731|GO:0006260
Vium440g00009 104 MobiDBLite consensus disorder prediction 22 38 - -
Vium440g00009 104 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 102 IPR007218 GO:0000731|GO:0006260
Vium440g00009 104 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium440g00009 Vium-Chr440 86293 86987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium440g00009 1 104 Core DNA Replication Machinery Family AT1G09815 46.774 7.61e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium440g00009 K03505 - gmx:100778329 145.976