Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium440g00008 ATGGCGTCGACCGGAAACATGAAGGGTTTTTACCGACAGAGGAAAACCACCGCTACGAAGAAATCTTCCAAAAAATCTCCGATCCCCACCGTGATCCAAACGCCGGCTACCTCCTCCGGCGGTAGAAACCAGGACCTCCAATCTGAATGCAATGAGAGTGAGGTGGTGTTGCGGCAATTCGATTTGAACATGGCTTATGGGCCCTGCCTCGGGATAGCGCGGCTTGCACGGTGGGAGCGTGCTCAGAGACTCGGTTTGAACCCTCCCCAGGAAATCGAGAGTCTCCTGAAGAGTGGGAAAGTTCAGATGGAGTCATTGTGGGGTGGTCGCATTTAG 336 0.5387 MASTGNMKGFYRQRKTTATKKSSKKSPIPTVIQTPATSSGGRNQDLQSECNESEVVLRQFDLNMAYGPCLGIARLARWERAQRLGLNPPQEIESLLKSGKVQMESLWGGRI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium440g00008 111 MobiDBLite consensus disorder prediction 1 50 - -
Vium440g00008 111 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 109 IPR007218 GO:0000731|GO:0006260
Vium440g00008 111 Pfam DNA polymerase delta, subunit 4 47 98 IPR007218 GO:0000731|GO:0006260
Vium440g00008 111 MobiDBLite consensus disorder prediction 22 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium440g00008 Vium-Chr440 86293 86987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium440g00008 1 111 Core DNA Replication Machinery Family AT1G09815 48.800 3.32e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium440g00008 K03505 - gmx:100778329 158.688