Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4404g00001 ATGCCAGGCATTCCTGTTGCCGCTCGTGCAACCTCAAGCCTCCATGATGCTTGTGAACATTTATCTGCGGAAGAGGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCCGTAGAATTTTACAATATTCTCCAGCGACGTGCCATGAGAAATCCATTATTTCTTCAGAGATGTTTGCACTACCAGATAAAGGAAAAACACAAGAAAAGAATACAAATGACAGTTTCCTTGATGCGGACTATTACGGAAAGTCAAAATGTGTTTCCCATGTCTATATGTCTCGCAAGGCGGGTTTCTGATCATGGATCTTCAAGGCAATCTGCCATGTATCGAATCGGTCGAATGTTCATCTTTCGAAACTCCCCTGGAATTGATTTAAATACTCAAGTCCAAGCAAATTTTACTCTTCCTGAAGTCAACAAGTTAGCTGATGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGAAAAACTCGAATTTATCATCTGGAGTCAATTCAAACTCCATGCCTTCGGATACAAATCATCTAGCTTTTTTTGAATCTGGAGAGTACTGCCTTTGGGGGAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGAGCAGAGATTATGTCAACTGTTGATTTGCTTCCATGTATTCTGAAGTCAGATTTTAAAAACGACTACACAAGAGTGTCTATTCAAGTTCCTTCTAATTTCGAGAATATGAGTGCATCAAAACAAGTACAAATCACAATTTCTGCGGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTGTATTTCATACACAGGCAGTGAAGTACCGTCCTCATCATTGTCTCACTTGATTGGATTGAGGGAAGGAAATGTCATGTTTAATTACAGGTATTACAATAATAAGTTACAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCATTCTGTTTGGTTAAATGTTCTAGTTTTAAGGGTCTAAGATGTCATTTGTCCTCGTCACATGATCTCTTCAACTTTGAATTTTGGGTATCGGATGAGTGTCATGCTGTAAATGTGACTGTGAAGAATGATATCTCGAGATCAGAGATTGTTGCTGATACTGTTGATCCAAGAGTGCAAACATTTTTCTATTGTGGAAAGCCCCTTAAGCGTAGGACACCAAAGGACCCATCTTCTAAAAATGCAGTAGGCTTAGAGTCTGCCTTTCCTGCAGGAGAGACTGATATTTTGGAGAAGGATGATGGAATTTCTGCCACAATTATTAGATCACATCCTGATCGAGACTCTGTCCAGTCAATATCAGACTGTGATCAATCAGTGCTCCAGTTTGCCAAGACTAGGAAGTTGTCAATTGAGTGTTCTGACTCACGAAATGCCCTATTAAGGAAACGACAGTTTTTTCATTCTCACAAAGCTCAGCCAATGACAATTGAACAAGTTCTATCAGATAAAGACAGCGAAGATGAAGTCGATGACGATGTTGCTGATTTTGAAGATAGAAGGATGCTTGAAAATTTTGTTGACGTGAGCAAGGATGAGAAGAATTTCATGCACATGTGGAACTCGTTTGTTCGGAAGCATCGTGTGATTGCAGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCGAAATTGCATGCAGCTGAGTTTGTTCGGTCACGCTCACTGGCCGGTTGTTGGAGAATATTTATGGTCAAGCTGTACAATCATGGTCTGCTGGATGCTCGAACCATGAATGACTGTAATGTTATTCTTGAGCAACAGCATAAGCAGAATTCAGACCCCATTAGCTAA 1824 0.4057 MPGIPVAARATSSLHDACEHLSAEEELAAEESLSIYCKPVEFYNILQRRAMRNPLFLQRCLHYQIKEKHKKRIQMTVSLMRTITESQNVFPMSICLARRVSDHGSSRQSAMYRIGRMFIFRNSPGIDLNTQVQANFTLPEVNKLADEARSCSLDILFVSTATVKNSNLSSGVNSNSMPSDTNHLAFFESGEYCLWGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFKNDYTRVSIQVPSNFENMSASKQVQITISAEEFGAKEKSPCISYTGSEVPSSSLSHLIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCSSFKGLRCHLSSSHDLFNFEFWVSDECHAVNVTVKNDISRSEIVADTVDPRVQTFFYCGKPLKRRTPKDPSSKNAVGLESAFPAGETDILEKDDGISATIIRSHPDRDSVQSISDCDQSVLQFAKTRKLSIECSDSRNALLRKRQFFHSHKAQPMTIEQVLSDKDSEDEVDDDVADFEDRRMLENFVDVSKDEKNFMHMWNSFVRKHRVIADGHISWACEAFSKLHAAEFVRSRSLAGCWRIFMVKLYNHGLLDARTMNDCNVILEQQHKQNSDPIS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4404g00001 607 Pfam VEFS-Box of polycomb protein 462 593 IPR019135 -
Vium4404g00001 607 CDD VEFS-box_EMF2-like 471 598 - -
Vium4404g00001 607 CDD ZnB-Zn_EMF2-like 290 368 - -
Vium4404g00001 607 PANTHER POLYCOMB GROUP PROTEIN 20 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4404g00001 Vium-Chr4404 5857 34633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4404g00001 1 597 C2H2 Transcription Factor Family AT5G51230 53.785 0.0 603