Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4384g00007 ATGAGTGAGTGTAAACGATGCACTCTCACAATTGTGCCTATGGAAGAAGCATCTTCAAGTGAACCCACCATTTCCAAGAAACGGAAGACCGCGGCTACTGCTAATTCTGCTTCCTTCCAGTTACGCTCTTCCGACACGCACCACTGGTTTCCCGACACTATCGTGTCGCCGGAAGCTTCCGTCAATTCCGCCGGCACCGTGGTTTCTGGTGAACCTTGCTCTGATCGATCGTGCTGTAGCTCCAGCCACGTTAAGGAGCTCCACACCGCGCCGTTAGATCTGCAGACCAAGGGTTTCAAAACGGTACATTCAACCAACCACAATTTCAAATCGTCCAGCTTGTTGAGTGAGTTTTCTGGAGACTCGGAAGAATCGACGATGTTTCCGGCGAAGTCTTCGGCGGAGGTGACCGAGAAACGAAAAGTCAAGGAGCCGCCTAAGGCGGAGATCGAAGAGTTTTTCGCAATGGCTGAAAAGTACGAGCAGAAGCGATTCGTAGAGAAGTACAACTTTGATATTGTTAGAGATACGCCGTTGGAGGGTCGCTACCAGTGGGTTCGTTTACATTGA 570 0.5035 MSECKRCTLTIVPMEEASSSEPTISKKRKTAATANSASFQLRSSDTHHWFPDTIVSPEASVNSAGTVVSGEPCSDRSCCSSSHVKELHTAPLDLQTKGFKTVHSTNHNFKSSSLLSEFSGDSEESTMFPAKSSAEVTEKRKVKEPPKAEIEEFFAMAEKYEQKRFVEKYNFDIVRDTPLEGRYQWVRLH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4384g00007 189 PIRSF CKI_KRP_plant 2 189 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4384g00007 189 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 21 188 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vium4384g00007 189 Pfam Cyclin-dependent kinase inhibitor 145 188 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vium4384g00007 189 Gene3D p27 128 189 IPR044898 -
Vium4384g00007 189 MobiDBLite consensus disorder prediction 16 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4384g00007 Vium-Chr4384 98677 100541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4384g00007 145 188 Core Cell Cycle Gene Families AT1G49620 72.727 9.07e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4384g00007 - - vun:114176886 351.673