Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4372g00007 ATGGGAGTGAAACAGCAAGGGATGATGGAGGAGGAGAAAGAAGAAACAACCAACCACAACCTAGAACAAAACAAAAACCAAAACCTTAACCTAGACCACAACAACCATCCTTCTAACACTCTCCCAATCAAGGAAGAGAGTGGTTTTAGATCAAAGGGTTTTGGAAGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCAGTGTCAACCCTTCTTGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCTCGACACGTGTCAGCACGTGCCAACTGCACCAAGTCACCCAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAGTCGGCAACTGCAGAACATCCCTCCTCCTGGCCTCTCTATTCGCGCCTCGATCTTCTTCTCAGGGGAACTGGCCCTCTCCTCTCTTCGCCACCGCCACCGCCGCTCGCGGTGCCACCCTCGTCGGCAGAACCGCCGCAACAGTCGCCGCCGTCAGAGCCACTTGCAGTTGTGCAGAACTCGAATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGTAAATTTTCAACGCAGTTTTCTTTTGTTTTATTTTAAGGGATTGAACATATTGAATAAGATTGTGATCATACGTAATAGAGAAAAAAAAAAAGAATTTCGTTGTTTAAAAATTAGCTTGTGGTTTTGTTTAATTTTATTTGGATAA 756 0.4656 MGVKQQGMMEEEKEETTNHNLEQNKNQNLNLDHNNHPSNTLPIKEESGFRSKGFGSGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLDLLLRGTGPLLSSPPPPPLAVPPSSAEPPQQSPPSEPLAVVQNSNGSNGVDDKLVKVNFQRSFLLFYFKGLNILNKIVIIRNREKKKEFRCLKISLWFCLILFG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4372g00007 251 Pfam Myb/SANT-like DNA-binding domain 62 149 IPR044822 -
Vium4372g00007 251 MobiDBLite consensus disorder prediction 160 190 - -
Vium4372g00007 251 Gene3D - 65 130 - -
Vium4372g00007 251 FunFam Trihelix transcription factor ASIL2 65 130 - -
Vium4372g00007 251 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 36 193 IPR044823 -
Vium4372g00007 251 MobiDBLite consensus disorder prediction 160 182 - -
Vium4372g00007 251 MobiDBLite consensus disorder prediction 21 45 - -
Vium4372g00007 251 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4372g00007 Vium-Chr4372 64971 65845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4372g00007 41 157 Trihelix Transcription Factor Family AT3G14180 34.711 2.49e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vium4372g00007 Myb_DNA-bind_4 2.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4372g00007 - - vum:124837841 423.32