Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium4372g00006 | ATGGCTGTGACTGCGTTTGATTCTTTTGCCACAGTTGTTCCTGTTCGAGGTGCCTCTATGTCTCCCACATTAAATCCTAAAACTGGTTCTCTGATGGGAAATCAATTTTGCCTTTTGGACTATAAATTTTCAAATGGCGATGTGGTAGTCTTCCGCTCCCCAACGAATCACAAGGAGACACACATAAAAACAATAGCTGCATTACCTGGTGAATGGTATGGCACTCATCATAACAACGATGTGATTAAGATCCCATCAGGACATTGTTGGGTTGAGGGAGACAACTCAGCCTCTAGCATTGATTCAAAGTCATTTGGACCGATTCCTTTGGCCCTAATTCGGGGAAGGGTTACCCATGTTGTGTGGCCTCCTCAAAGAATAGGAAGTGTCAAGAGTACTCCACAACAAAGATTATCTTCTGTATTGGAATAA | 432 | 0.4282 | MAVTAFDSFATVVPVRGASMSPTLNPKTGSLMGNQFCLLDYKFSNGDVVVFRSPTNHKETHIKTIAALPGEWYGTHHNNDVIKIPSGHCWVEGDNSASSIDSKSFGPIPLALIRGRVTHVVWPPQRIGSVKSTPQQRLSSVLE | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium4372g00006 | 143 | FunFam | Mitochondrial inner membrane protease subunit | 6 | 135 | - | - | |
Vium4372g00006 | 143 | SUPERFAMILY | LexA/Signal peptidase | 10 | 130 | IPR036286 | - | |
Vium4372g00006 | 143 | PANTHER | MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 | 2 | 138 | IPR037730 | GO:0006465|GO:0006627|GO:0008236|GO:0042720 | |
Vium4372g00006 | 143 | Gene3D | Umud Fragment, subunit A | 7 | 138 | - | - | |
Vium4372g00006 | 143 | Pfam | Signal peptidase, peptidase S26 | 79 | 122 | IPR019533 | GO:0004252|GO:0006465 | |
Vium4372g00006 | 143 | Pfam | Signal peptidase, peptidase S26 | 8 | 71 | IPR019533 | GO:0004252|GO:0006465 | |
Vium4372g00006 | 143 | CDD | S26_SPase_I | 12 | 117 | IPR019533 | GO:0004252|GO:0006465 | |
Vium4372g00006 | 143 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 61 | 73 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Vium4372g00006 | 143 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 8 | 24 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Vium4372g00006 | 143 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 84 | 103 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium4372g00006 | Vium-Chr4372 | 51831 | 53750 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium4372g00006 | 20 | 134 | MADS-box Gene Family | AT1G29960 | 37.190 | 8.13e-21 | 80.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium4372g00006 | K09648 | - | gmx:100527429 | 238.039 |