Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium436g00015 ATGGCGGCAATGGGAGTTGCAGCACAAACGCAGTTACAGTTAGAGAAACGTGTGTTAGAGGGTTTCACTTCGAGATCCATGGAATTGAAATGGGTTAGTCGAAGAAGCAGCAAAAGCTCACAGCTTGAGAAGACGAAGAAGCAGTTGAGACCGCTTTTCCCAATTTACATTTCCACCGACCCACGCCACGTCGATCCTCTCCGTCTCCGGGACCTCTTCACCGATTGCAACTACTCTACCCAAAGATTTCCGACCCGACCCGGACCTGATCCCGTGGACATCCACAAGCTCCGCATTGCTCTGTCTCACAGCGCCGTGGTTCTGTCCGTCTTCTGCAACCTCCGCCACGTAAACGGCGTGGTTCCATATCAAGACAATTTATCGTCTTCTTTAATGGCGGATTTCTTCACGCCGGTTTCTCCTTCACGTGATCAATTGGTCGGGTTTGGCCGTGCCGTTTCCGATTATGGCCTCACCGCTTCGATTTACGATGTCGTGGTTATGCCTTCCTTGCAGAGAATGGGAATTGGTCGGATGATAGTTAAAAAAATTGCCAGAGTGCTTGCAAATAGAGACATATACGACATAGCAGCCCTTTGCTCAGAGAATGAAAGGTTATTTTTTAAGGCGTGTGGATTTGGGGACGACATTTTGAACTCCACTACCATGATGTACAGAAGAACTGTTCCATTAATAACCCAGGAAGGTAAATAA 714 0.4804 MAAMGVAAQTQLQLEKRVLEGFTSRSMELKWVSRRSSKSSQLEKTKKQLRPLFPIYISTDPRHVDPLRLRDLFTDCNYSTQRFPTRPGPDPVDIHKLRIALSHSAVVLSVFCNLRHVNGVVPYQDNLSSSLMADFFTPVSPSRDQLVGFGRAVSDYGLTASIYDVVVMPSLQRMGIGRMIVKKIARVLANRDIYDIAALCSENERLFFKACGFGDDILNSTTMMYRRTVPLITQEGK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium436g00015 237 Pfam Acetyltransferase (GNAT) family 143 213 IPR000182 GO:0016747
Vium436g00015 237 Gene3D - 53 217 - -
Vium436g00015 237 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 56 224 IPR039143 GO:0004343|GO:0006048
Vium436g00015 237 CDD NAT_SF 144 193 - -
Vium436g00015 237 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 139 213 IPR016181 -
Vium436g00015 237 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 92 235 IPR000182 GO:0016747
Vium436g00015 237 Coils Coil 233 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium436g00015 Vium-Chr436 53935 56321 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium436g00015 Acetyltransf_1 1.6e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium436g00015 - - var:108331472 468.388