Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium4346g00007 | TTCCGCAAGATTCATGTTAGACTTGTTAGGGAGCTCGAGAAGAAGTTTAGTGGGAAGGATGTTATCTTGGTTGCCACCCGAAGGATATTGAGGCCACCAAAGAAGGGTTCTGCTGTTCAGCGACCACGCAGCCGAACTCTTACTGCTGTTCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTGAGGTTTAGAATTGATGGATCCAAGATCATGAAGGTTTTCTTGGACCCGAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACATTTGCTGCAGTGTACAGGAAGCTTTCGGGCAAAGATGTTGTGTTTGATTATCCTGTCTCAGAGGCTTAG | 360 | 0.4639 | FRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRFRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFDYPVSEA | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium4346g00007 | 119 | PANTHER | 40S RIBOSOMAL PROTEIN S7 | 1 | 118 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 | |
Vium4346g00007 | 119 | ProSitePatterns | Ribosomal protein S7e signature. | 7 | 20 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 | |
Vium4346g00007 | 119 | Pfam | Ribosomal protein S7e | 1 | 114 | IPR000554 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium4346g00007 | Vium-Chr4346 | 52049 | 53149 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium4346g00007 | 1 | 119 | Cytoplasmic Ribosomal Protein Gene Family | AT1G48830 | 81.513 | 7.13e-72 | 211 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium4346g00007 | K02993 | - | gmx:100527680 | 228.794 |