Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4335g00030 ATGACCAACACCACCCTCCAATATTACACTTCAAAACATACCAATACCATGCATTCCCACATTCCTTTCCATTACAACGCCATGACCAAACCAAGAACCCTCAACCTCACCTTCTTCATGCAAGACATCCAAATTTTTGAGATTTTCCTTGCGGTTCTTGTCTTCCTACTCATTCATTCTCTTAGACAAAAGAGGCACCATGGCCTAGTCGTTTGGCCTGTCCTTGGAATGGTTCCATCTTTGGTCACAGGACTCAGAACAAACTTGTATGAATGGATCACAGAAGTGCTCAAAAGGCAAAACGGGACATTCAGATTCAAAGGGCCTTGCTTTAGCAACCTCAACTGCATTGTCACTGCTGATCCTCGCAACATGGAGCACCTTCTCAAAACCAAGTTCCCTCTGTTCCCTAAGGGAGGATACTTCAGGAACACGGTTAGAGACCTGCTAGGAGATGGTATATTCAATGCAGACGATGACACCTGGCAGAAGCAAAGGAAAATAGCAAGCATTGAGTTTCATTCAACCAAGTTCAGACAATTAACAACGGAATCCTTGTTCGAGCTTGTCCACTATAGGCTCTTGCCTGTGTTAGAGGCATCGGTTAAGAAATCGGTTGCAATAGACCTGCAAGACATTCTCTTAAGGCTAACTTTTGACAATGTTTGCATGATTGCCTTTGGTGTTGATCCAGGTTGTTTGCGCCTGGGTTTACCTAAGATACCATTTGCCAAAGCCTTTGAGGATGCAACAGAAGCCACAGTGTTTCGTTTTGTTACCCCAACGTGCGTTTGGAAGGCCATGAGGCTTCTCAACCTCGGGGTGGAAAGGAAGCTGAAGAAGTCCATAAAAGGGGTTGATGAGTTTGCTGAGAATGTCATTCGGACTAGAAAGAAAGAACTCTCTTTGCAATGTGAAGACACCAATAATAGGTCAGATTTGTTAACTGTGTTCATGAGGCTGAAGGATGAGAGTGGAAGACCCTACTCGGATAAGTTTTTGAGGGATATATGTGTGAACTTTATATTGGCAGGGAGGGACACCTCTTCGGTTGCTTTGAGTTGGTTTTTCTGGTTGCTTGAACAGAATCCTGAAGTGGAGGAGAATATTCTAGCAGAGATATGCATGTTGGTGAGTCAAAGGAACGACATAAAAAGGGAAGAGTTTGATAATTCTTTGAGATTTAGGCCGGAGGAGATCAAGAAGATGGACTATTTGCATGCTGCTTTATCAGAAGCTCTCAGGTTATACCCTTCTGTGCCTGTGGATCACAAGGAGGTTGTTAAAGATGACACATTCCCAGATGGAACGGTACTAAAGAAAGGAACAAAAGTGATCTACGCAATCTATGCAATGGGAAGAATGGAGAGCATATGGGGGAAGGACTGGAAGGAGTTCAAGCCAGAAAGGTGGCTAAGAGATGGGAGGTTCATGAGTGAGTCTGCCTACAAATTCACTGCATTCAATGGTGGTCCTCGTTTGTGCTTAGGCAAAGATTTTGCATACTACCAGATGAAATATGCTGCAGCCAGCATCATATTCCGGTACCGTGTGAAGGTGGTGGAGAACCACCCTGTAGAGCCAAAGCTTGCCTTAACCATGTACATGAAGCATGGCTTAAAAGTTAACCTATACCGCAGGGATGTTGCACAAATTCACAGACACTTGGAGGAAGGGTTCAAATAA 1686 0.4413 MTNTTLQYYTSKHTNTMHSHIPFHYNAMTKPRTLNLTFFMQDIQIFEIFLAVLVFLLIHSLRQKRHHGLVVWPVLGMVPSLVTGLRTNLYEWITEVLKRQNGTFRFKGPCFSNLNCIVTADPRNMEHLLKTKFPLFPKGGYFRNTVRDLLGDGIFNADDDTWQKQRKIASIEFHSTKFRQLTTESLFELVHYRLLPVLEASVKKSVAIDLQDILLRLTFDNVCMIAFGVDPGCLRLGLPKIPFAKAFEDATEATVFRFVTPTCVWKAMRLLNLGVERKLKKSIKGVDEFAENVIRTRKKELSLQCEDTNNRSDLLTVFMRLKDESGRPYSDKFLRDICVNFILAGRDTSSVALSWFFWLLEQNPEVEENILAEICMLVSQRNDIKREEFDNSLRFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVKDDTFPDGTVLKKGTKVIYAIYAMGRMESIWGKDWKEFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYRVKVVENHPVEPKLALTMYMKHGLKVNLYRRDVAQIHRHLEEGFK 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4335g00030 561 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS P450 superfamily signature 486 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 Gene3D Cytochrome P450 66 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 CDD CYP86A 104 540 - -
Vium4335g00030 561 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS E-class P450 group I signature 495 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS E-class P450 group I signature 485 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 FunFam Cytochrome P450 60 550 - -
Vium4335g00030 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 488 497 IPR017972 GO:0005506|GO:0016705
Vium4335g00030 561 SUPERFAMILY Cytochrome P450 68 547 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 Pfam Cytochrome P450 71 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4335g00030 561 PANTHER CYTOCHROME P450 58 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4335g00030 Vium-Chr4335 109316 112100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4335g00030 15 560 Cytochrome P450 AT5G23190 71.115 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4335g00030 K15402 - gmx:100809503 1031.94