Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium432g00006 ATGATTTGCCATCAGTTTTTCGTTTCATGCAGAGCCACGAAACAGCAGGCATGTGTGGAGGAGAACTTGTACAAGGTACTGAGTTTGAGTCCCATGAGTGCAACCACAGATGACATAAAGAAAGCGTACAGATCAATGGCTCTTCAGTACCACCCCGACGTGTGCCATGACAGTTCCAAGAAAGAAGAGTTGACGAGGATGTTTGTGCAGCTCAACACCGCCTACACCACCTTGTCCAACCCACAACTTCGAGCGGATTATGATTATGAGTTGGGTTTGAGAAGCAAGAAAAGTGTGGGTGATGAGAGTTGGAGATGTAGGTGGCACAAAGGGACGAATCCTGGGGCTCTAGAGTCAGAGCACGAAACATGA 372 0.4785 MICHQFFVSCRATKQQACVEENLYKVLSLSPMSATTDDIKKAYRSMALQYHPDVCHDSSKKEELTRMFVQLNTAYTTLSNPQLRADYDYELGLRSKKSVGDESWRCRWHKGTNPGALESEHET 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium432g00006 123 SMART dnaj_3 21 83 IPR001623 -
Vium432g00006 123 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 15 97 - -
Vium432g00006 123 SUPERFAMILY Chaperone J-domain 15 91 IPR036869 -
Vium432g00006 123 Pfam DnaJ domain 22 88 IPR001623 -
Vium432g00006 123 Gene3D DnaJ domain 8 109 IPR036869 -
Vium432g00006 123 PRINTS DnaJ domain signature 43 58 IPR001623 -
Vium432g00006 123 PRINTS DnaJ domain signature 63 83 IPR001623 -
Vium432g00006 123 PRINTS DnaJ domain signature 25 43 IPR001623 -
Vium432g00006 123 ProSiteProfiles dnaJ domain profile. 22 91 IPR001623 -
Vium432g00006 123 CDD DnaJ 22 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium432g00006 Vium-Chr432 57373 60589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium432g00006 24 88 C2H2 Transcription Factor Family AT1G74250 41.791 1.16e-07 47.0