Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4328g00033 ATGCCGACGCGTTGTGAAATATGCTGCGAGATAATGATCGCGATCTTGCTTCCTCCAATCGGAGTTTGCTTTCGCCACGGCTGTTGCAGCGTTGAATTCATCATCTGTTTGCTCCTCACAATTCTAGGTTATATTCCTGGCATCATTTATGCTCTCTATGCCATTATCTTCGTTGATCGTGACCAGTACTTTGATGAATACAGGCGTCCTCTCTATACGCAATACTGA 228 0.4474 MPTRCEICCEIMIAILLPPIGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYTQY 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4328g00033 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Vium4328g00033 75 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4328g00033 Vium-Chr4328 249750 250327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4328g00033 1 72 RCI2 Gene Family AT4G28088 77.778 9.68e-40 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4328g00033 - - gmx:100306426 160.229