Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4328g00026 ATGGCTTCATCATCTCCATTTTTGGTGATGCTCTCAATGTGCTTGATAATTTGCTGCTGTGAAGCCAAACAGTATGTGGTTGGAGGCACTGCAAATTCCTGGAAGACTCCTCTCTCCTCACCAGATTCACTCATCCACTGGGCCAACTCTCACCATTTCAAAATCGGCGATACTCTCGTATTTAAATACGATGAGAGAACTGAGTCAGTGCATGAAGTGAACAAGACAGACCACGAAAGGTGCAATACGGTGGGGAAAGAACATGTCGTGTTCAAAGATGGTAACACCAAGGTCTTGCTTACGAAATCTGGATTCAGACATTTCATAAGTGGAAATCAGAGTCACTGCCGCATGGGCTTAAAACTCACAGTGGTTGTCGTCACTGCCAAAACCAAAAACAATCCTACTTCTCCAACACCATCACCATCACCTTCACCTTCACCTTCACCTTCACCTTCACCTTCACCATTGCCATCGCCTTCACCACTTCCAAATAATCACGGTGTTAATGGTAGTTCGAGTGGTGGATTCATTATGATGTGGTTGTTGGGGTTCATCATGTTACTGCTTTAA 573 0.445 MASSSPFLVMLSMCLIICCCEAKQYVVGGTANSWKTPLSSPDSLIHWANSHHFKIGDTLVFKYDERTESVHEVNKTDHERCNTVGKEHVVFKDGNTKVLLTKSGFRHFISGNQSHCRMGLKLTVVVVTAKTKNNPTSPTPSPSPSPSPSPSPSPSPLPSPSPLPNNHGVNGSSSGGFIMMWLLGFIMLLL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4328g00026 190 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Vium4328g00026 190 ProSiteProfiles Phytocyanin domain profile. 23 128 IPR003245 GO:0009055
Vium4328g00026 190 PANTHER BLUE COPPER PROTEIN 23 136 IPR039391 GO:0009055
Vium4328g00026 190 Gene3D - 20 130 IPR008972 -
Vium4328g00026 190 FunFam Cupredoxin superfamily protein 22 132 - -
Vium4328g00026 190 SUPERFAMILY Cupredoxins 22 127 IPR008972 -
Vium4328g00026 190 MobiDBLite consensus disorder prediction 137 163 - -
Vium4328g00026 190 MobiDBLite consensus disorder prediction 131 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4328g00026 1 153 Phytocyanin Superfamily AT4G31840 40.385 1.54e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4328g00026 - - gmx:547770 226.868